Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LRCH3Q96II8 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC18.22■□□□□ 0.51
LRCH3Q96II8 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC18.22■□□□□ 0.51
LRCH3Q96II8 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC18.22■□□□□ 0.51
LRCH3Q96II8 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
LRCH3Q96II8 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
LRCH3Q96II8 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LRCH3Q96II8 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC18.22■□□□□ 0.51
LRCH3Q96II8 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC18.22■□□□□ 0.51
LRCH3Q96II8 RARRES2P9-201ENST00000565168 469 ntBASIC18.22■□□□□ 0.51
LRCH3Q96II8 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC18.22■□□□□ 0.51
LRCH3Q96II8 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LRCH3Q96II8 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LRCH3Q96II8 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
LRCH3Q96II8 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
LRCH3Q96II8 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
LRCH3Q96II8 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LRCH3Q96II8 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
LRCH3Q96II8 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LRCH3Q96II8 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LRCH3Q96II8 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC18.21■□□□□ 0.51
LRCH3Q96II8 ANO7L1-203ENST00000602586 1720 ntBASIC18.21■□□□□ 0.51
LRCH3Q96II8 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
LRCH3Q96II8 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
LRCH3Q96II8 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC18.21■□□□□ 0.51
LRCH3Q96II8 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
LRCH3Q96II8 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC18.21■□□□□ 0.51
LRCH3Q96II8 OSM-203ENST00000403463 464 ntTSL 3 BASIC18.21■□□□□ 0.51
LRCH3Q96II8 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC18.21■□□□□ 0.51
LRCH3Q96II8 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC18.21■□□□□ 0.51
LRCH3Q96II8 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
LRCH3Q96II8 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC18.21■□□□□ 0.51
LRCH3Q96II8 PPA1-206ENST00000625364 644 ntTSL 5 BASIC18.21■□□□□ 0.51
LRCH3Q96II8 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
LRCH3Q96II8 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
LRCH3Q96II8 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LRCH3Q96II8 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LRCH3Q96II8 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC18.21■□□□□ 0.51
LRCH3Q96II8 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
LRCH3Q96II8 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LRCH3Q96II8 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
LRCH3Q96II8 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LRCH3Q96II8 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC18.21■□□□□ 0.5
LRCH3Q96II8 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
LRCH3Q96II8 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC18.21■□□□□ 0.5
LRCH3Q96II8 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LRCH3Q96II8 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LRCH3Q96II8 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
LRCH3Q96II8 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LRCH3Q96II8 ESPNP-201ENST00000270691 2015 ntBASIC18.2■□□□□ 0.5
LRCH3Q96II8 LTB4R2-202ENST00000528054 3092 ntBASIC18.2■□□□□ 0.5
LRCH3Q96II8 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC18.2■□□□□ 0.5
LRCH3Q96II8 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LRCH3Q96II8 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
LRCH3Q96II8 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
LRCH3Q96II8 NOC2LP2-201ENST00000407594 1944 ntBASIC18.2■□□□□ 0.5
LRCH3Q96II8 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LRCH3Q96II8 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC18.2■□□□□ 0.5
LRCH3Q96II8 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
LRCH3Q96II8 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LRCH3Q96II8 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
LRCH3Q96II8 BRWD1P1-201ENST00000401091 371 ntBASIC18.2■□□□□ 0.5
LRCH3Q96II8 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC18.2■□□□□ 0.5
LRCH3Q96II8 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
LRCH3Q96II8 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC18.2■□□□□ 0.5
LRCH3Q96II8 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC18.2■□□□□ 0.5
LRCH3Q96II8 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC18.2■□□□□ 0.5
LRCH3Q96II8 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
LRCH3Q96II8 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC18.2■□□□□ 0.5
LRCH3Q96II8 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC18.2■□□□□ 0.5
LRCH3Q96II8 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
LRCH3Q96II8 TECR-220ENST00000600083 1204 ntTSL 2 BASIC18.2■□□□□ 0.5
LRCH3Q96II8 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC18.2■□□□□ 0.5
LRCH3Q96II8 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
LRCH3Q96II8 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
LRCH3Q96II8 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
LRCH3Q96II8 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
LRCH3Q96II8 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC18.2■□□□□ 0.5
LRCH3Q96II8 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC18.2■□□□□ 0.5
LRCH3Q96II8 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC18.2■□□□□ 0.5
LRCH3Q96II8 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LRCH3Q96II8 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC18.19■□□□□ 0.5
LRCH3Q96II8 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC18.19■□□□□ 0.5
LRCH3Q96II8 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LRCH3Q96II8 MADD-208ENST00000405573 1823 ntTSL 5 BASIC18.19■□□□□ 0.5
LRCH3Q96II8 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LRCH3Q96II8 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LRCH3Q96II8 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
LRCH3Q96II8 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
LRCH3Q96II8 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
LRCH3Q96II8 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LRCH3Q96II8 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LRCH3Q96II8 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC18.19■□□□□ 0.5
LRCH3Q96II8 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
LRCH3Q96II8 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LRCH3Q96II8 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
LRCH3Q96II8 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LRCH3Q96II8 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC18.19■□□□□ 0.5
LRCH3Q96II8 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC18.19■□□□□ 0.5
LRCH3Q96II8 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms