Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PTP4A1Q93096 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PTP4A1Q93096 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
PTP4A1Q93096 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
PTP4A1Q93096 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PTP4A1Q93096 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PTP4A1Q93096 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PTP4A1Q93096 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
PTP4A1Q93096 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC15.24■□□□□ 0.03
PTP4A1Q93096 CDV3-207ENST00000508481 661 ntTSL 3 BASIC15.24■□□□□ 0.03
PTP4A1Q93096 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC15.24■□□□□ 0.03
PTP4A1Q93096 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC15.24■□□□□ 0.03
PTP4A1Q93096 AC012615.1-201ENST00000565797 1299 ntBASIC15.24■□□□□ 0.03
PTP4A1Q93096 BNIP3P18-201ENST00000593976 575 ntBASIC15.24■□□□□ 0.03
PTP4A1Q93096 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PTP4A1Q93096 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
PTP4A1Q93096 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
PTP4A1Q93096 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
PTP4A1Q93096 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC15.24■□□□□ 0.03
PTP4A1Q93096 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
PTP4A1Q93096 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
PTP4A1Q93096 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC15.24■□□□□ 0.03
PTP4A1Q93096 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PTP4A1Q93096 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PTP4A1Q93096 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PTP4A1Q93096 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PTP4A1Q93096 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
PTP4A1Q93096 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC15.24■□□□□ 0.03
PTP4A1Q93096 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PTP4A1Q93096 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
PTP4A1Q93096 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC15.23■□□□□ 0.03
PTP4A1Q93096 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
PTP4A1Q93096 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
PTP4A1Q93096 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC15.23■□□□□ 0.03
PTP4A1Q93096 FUK-207ENST00000571514 3054 ntTSL 2 BASIC15.23■□□□□ 0.03
PTP4A1Q93096 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PTP4A1Q93096 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC15.23■□□□□ 0.03
PTP4A1Q93096 AC005052.1-201ENST00000625181 2492 ntBASIC15.23■□□□□ 0.03
PTP4A1Q93096 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC15.23■□□□□ 0.03
PTP4A1Q93096 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PTP4A1Q93096 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC15.23■□□□□ 0.03
PTP4A1Q93096 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC15.23■□□□□ 0.03
PTP4A1Q93096 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC15.23■□□□□ 0.03
PTP4A1Q93096 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PTP4A1Q93096 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
PTP4A1Q93096 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PTP4A1Q93096 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC15.23■□□□□ 0.03
PTP4A1Q93096 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PTP4A1Q93096 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC15.23■□□□□ 0.03
PTP4A1Q93096 POM121L3P-201ENST00000419331 1163 ntBASIC15.23■□□□□ 0.03
PTP4A1Q93096 AL020989.1-201ENST00000422979 469 ntBASIC15.23■□□□□ 0.03
PTP4A1Q93096 IGHV3-47-201ENST00000425060 335 ntBASIC15.23■□□□□ 0.03
PTP4A1Q93096 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC15.23■□□□□ 0.03
PTP4A1Q93096 AC074051.2-201ENST00000565115 352 ntBASIC15.23■□□□□ 0.03
PTP4A1Q93096 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC15.23■□□□□ 0.03
PTP4A1Q93096 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PTP4A1Q93096 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
PTP4A1Q93096 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC15.23■□□□□ 0.03
PTP4A1Q93096 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC15.23■□□□□ 0.03
PTP4A1Q93096 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PTP4A1Q93096 AC004817.3-201ENST00000602957 2129 ntBASIC15.23■□□□□ 0.03
PTP4A1Q93096 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PTP4A1Q93096 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
PTP4A1Q93096 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
PTP4A1Q93096 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
PTP4A1Q93096 PC-204ENST00000524491 1714 ntTSL 2 BASIC15.23■□□□□ 0.03
PTP4A1Q93096 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
PTP4A1Q93096 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
PTP4A1Q93096 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
PTP4A1Q93096 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
PTP4A1Q93096 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
PTP4A1Q93096 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC15.22■□□□□ 0.03
PTP4A1Q93096 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PTP4A1Q93096 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PTP4A1Q93096 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PTP4A1Q93096 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PTP4A1Q93096 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PTP4A1Q93096 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PTP4A1Q93096 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC15.22■□□□□ 0.03
PTP4A1Q93096 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
PTP4A1Q93096 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
PTP4A1Q93096 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PTP4A1Q93096 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PTP4A1Q93096 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
PTP4A1Q93096 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PTP4A1Q93096 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
PTP4A1Q93096 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
PTP4A1Q93096 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PTP4A1Q93096 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
PTP4A1Q93096 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
PTP4A1Q93096 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PTP4A1Q93096 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
PTP4A1Q93096 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PTP4A1Q93096 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
PTP4A1Q93096 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
PTP4A1Q93096 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
PTP4A1Q93096 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC15.22■□□□□ 0.03
PTP4A1Q93096 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC15.22■□□□□ 0.03
PTP4A1Q93096 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PTP4A1Q93096 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms