Protein–RNA interactions for Protein: Q8WXH0

SYNE2, Nesprin-2, humanhuman

Known RBP Predictions only

Length 6,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2Q8WXH0 AL357833.1-201ENST00000413993 832 ntTSL 3 BASIC6.69□□□□□ -1.34
SYNE2Q8WXH0 CTBP2P6-201ENST00000526402 1229 ntBASIC6.69□□□□□ -1.34
SYNE2Q8WXH0 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC6.69□□□□□ -1.34
SYNE2Q8WXH0 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC6.69□□□□□ -1.34
SYNE2Q8WXH0 AC105021.1-202ENST00000570572 669 ntBASIC6.69□□□□□ -1.34
SYNE2Q8WXH0 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC6.69□□□□□ -1.34
SYNE2Q8WXH0 Metazoa_SRP.127-201ENST00000614914 302 ntBASIC6.69□□□□□ -1.34
SYNE2Q8WXH0 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC6.69□□□□□ -1.34
SYNE2Q8WXH0 PCDHAC2-203ENST00000615316 3011 ntBASIC6.69□□□□□ -1.34
SYNE2Q8WXH0 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
SYNE2Q8WXH0 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
SYNE2Q8WXH0 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
SYNE2Q8WXH0 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
SYNE2Q8WXH0 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC6.69□□□□□ -1.34
SYNE2Q8WXH0 TP73-209ENST00000603362 1668 ntTSL 5 BASIC6.69□□□□□ -1.34
SYNE2Q8WXH0 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
SYNE2Q8WXH0 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC6.69□□□□□ -1.34
SYNE2Q8WXH0 AC104073.2-201ENST00000453737 312 ntBASIC6.69□□□□□ -1.34
SYNE2Q8WXH0 RPSAP36-202ENST00000494591 1261 ntBASIC6.69□□□□□ -1.34
SYNE2Q8WXH0 BANF1-205ENST00000527348 670 ntAPPRIS P1 TSL 3 BASIC6.69□□□□□ -1.34
SYNE2Q8WXH0 AC254633.1-201ENST00000606790 345 ntBASIC6.69□□□□□ -1.34
SYNE2Q8WXH0 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
SYNE2Q8WXH0 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC6.69□□□□□ -1.34
SYNE2Q8WXH0 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
SYNE2Q8WXH0 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC6.69□□□□□ -1.34
SYNE2Q8WXH0 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
SYNE2Q8WXH0 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
SYNE2Q8WXH0 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC6.69□□□□□ -1.34
SYNE2Q8WXH0 AC011239.1-201ENST00000430988 584 ntTSL 4 BASIC6.69□□□□□ -1.34
SYNE2Q8WXH0 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
SYNE2Q8WXH0 AC108199.1-201ENST00000504249 508 ntTSL 3 BASIC6.69□□□□□ -1.34
SYNE2Q8WXH0 ACR-203ENST00000529621 708 ntTSL 5 BASIC6.69□□□□□ -1.34
SYNE2Q8WXH0 AF111169.3-201ENST00000553991 756 ntTSL 5 BASIC6.69□□□□□ -1.34
SYNE2Q8WXH0 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC6.69□□□□□ -1.34
SYNE2Q8WXH0 AC092171.5-201ENST00000608012 942 ntBASIC6.69□□□□□ -1.34
SYNE2Q8WXH0 AC105137.3-201ENST00000617588 984 ntBASIC6.69□□□□□ -1.34
SYNE2Q8WXH0 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
SYNE2Q8WXH0 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC6.69□□□□□ -1.34
SYNE2Q8WXH0 ME2-216ENST00000639850 2331 ntTSL 5 BASIC6.69□□□□□ -1.34
SYNE2Q8WXH0 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
SYNE2Q8WXH0 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
SYNE2Q8WXH0 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC6.69□□□□□ -1.34
SYNE2Q8WXH0 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC6.69□□□□□ -1.34
SYNE2Q8WXH0 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
SYNE2Q8WXH0 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
SYNE2Q8WXH0 GAD1-201ENST00000344257 1029 ntTSL 5 BASIC6.69□□□□□ -1.34
SYNE2Q8WXH0 AC026316.1-201ENST00000398900 414 ntBASIC6.69□□□□□ -1.34
SYNE2Q8WXH0 PSMD4P1-201ENST00000433951 1109 ntBASIC6.69□□□□□ -1.34
SYNE2Q8WXH0 HIST2H2BB-201ENST00000449108 381 ntBASIC6.69□□□□□ -1.34
SYNE2Q8WXH0 HNRNPA1P13-201ENST00000510646 963 ntBASIC6.69□□□□□ -1.34
SYNE2Q8WXH0 TDH-203ENST00000531764 1110 ntBASIC6.69□□□□□ -1.34
SYNE2Q8WXH0 HIST2H2BF-204ENST00000545683 999 ntTSL 2 BASIC6.69□□□□□ -1.34
SYNE2Q8WXH0 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC6.69□□□□□ -1.34
SYNE2Q8WXH0 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
SYNE2Q8WXH0 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
SYNE2Q8WXH0 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
SYNE2Q8WXH0 AC012569.1-201ENST00000591191 1524 ntBASIC6.69□□□□□ -1.34
SYNE2Q8WXH0 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
SYNE2Q8WXH0 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
SYNE2Q8WXH0 AC114812.1-201ENST00000421868 689 ntTSL 2 BASIC6.69□□□□□ -1.34
SYNE2Q8WXH0 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
SYNE2Q8WXH0 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC6.69□□□□□ -1.34
SYNE2Q8WXH0 AC012618.1-201ENST00000461223 412 ntBASIC6.69□□□□□ -1.34
SYNE2Q8WXH0 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC6.69□□□□□ -1.34
SYNE2Q8WXH0 SAMD11P1-201ENST00000571429 661 ntBASIC6.69□□□□□ -1.34
SYNE2Q8WXH0 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC6.69□□□□□ -1.34
SYNE2Q8WXH0 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
SYNE2Q8WXH0 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC6.68□□□□□ -1.34
SYNE2Q8WXH0 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
SYNE2Q8WXH0 F10-201ENST00000375551 1509 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
SYNE2Q8WXH0 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC6.68□□□□□ -1.34
SYNE2Q8WXH0 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
SYNE2Q8WXH0 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
SYNE2Q8WXH0 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC6.68□□□□□ -1.34
SYNE2Q8WXH0 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC6.68□□□□□ -1.34
SYNE2Q8WXH0 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC6.68□□□□□ -1.34
SYNE2Q8WXH0 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC6.68□□□□□ -1.34
SYNE2Q8WXH0 SH3BGR-209ENST00000458295 812 ntTSL 3 BASIC6.68□□□□□ -1.34
SYNE2Q8WXH0 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC6.68□□□□□ -1.34
SYNE2Q8WXH0 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC6.68□□□□□ -1.34
SYNE2Q8WXH0 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC6.68□□□□□ -1.34
SYNE2Q8WXH0 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC6.68□□□□□ -1.34
SYNE2Q8WXH0 HIST1H3C-201ENST00000612966 411 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
SYNE2Q8WXH0 AL033527.5-202ENST00000641632 1098 ntBASIC6.68□□□□□ -1.34
SYNE2Q8WXH0 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC6.68□□□□□ -1.34
SYNE2Q8WXH0 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC6.68□□□□□ -1.34
SYNE2Q8WXH0 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
SYNE2Q8WXH0 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC6.68□□□□□ -1.34
SYNE2Q8WXH0 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC6.68□□□□□ -1.34
SYNE2Q8WXH0 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC6.68□□□□□ -1.34
SYNE2Q8WXH0 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
SYNE2Q8WXH0 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC6.68□□□□□ -1.34
SYNE2Q8WXH0 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC6.68□□□□□ -1.34
SYNE2Q8WXH0 COX5BP2-201ENST00000392354 334 ntBASIC6.68□□□□□ -1.34
SYNE2Q8WXH0 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
SYNE2Q8WXH0 CNRIP1-202ENST00000409559 644 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
SYNE2Q8WXH0 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
SYNE2Q8WXH0 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC6.68□□□□□ -1.34
SYNE2Q8WXH0 PRB3-202ENST00000538488 1283 ntAPPRIS P5 TSL 5 BASIC6.68□□□□□ -1.34
SYNE2Q8WXH0 EMC4-208ENST00000559078 599 ntTSL 3 BASIC6.68□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms