Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
SHKBP1Q8TBC3 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SHKBP1Q8TBC3 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SHKBP1Q8TBC3 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
SHKBP1Q8TBC3 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC17.73■□□□□ 0.43
SHKBP1Q8TBC3 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SHKBP1Q8TBC3 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC17.73■□□□□ 0.43
SHKBP1Q8TBC3 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SHKBP1Q8TBC3 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SHKBP1Q8TBC3 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SHKBP1Q8TBC3 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
SHKBP1Q8TBC3 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SHKBP1Q8TBC3 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
SHKBP1Q8TBC3 HMGA1P7-201ENST00000406908 502 ntBASIC17.73■□□□□ 0.43
SHKBP1Q8TBC3 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC17.73■□□□□ 0.43
SHKBP1Q8TBC3 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC17.73■□□□□ 0.43
SHKBP1Q8TBC3 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC17.73■□□□□ 0.43
SHKBP1Q8TBC3 FAM86C2P-203ENST00000528684 1004 ntBASIC17.73■□□□□ 0.43
SHKBP1Q8TBC3 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC17.73■□□□□ 0.43
SHKBP1Q8TBC3 CD7-202ENST00000578509 925 ntTSL 3 BASIC17.73■□□□□ 0.43
SHKBP1Q8TBC3 MIR3197-201ENST00000582241 73 ntBASIC17.73■□□□□ 0.43
SHKBP1Q8TBC3 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC17.73■□□□□ 0.43
SHKBP1Q8TBC3 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SHKBP1Q8TBC3 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC17.73■□□□□ 0.43
SHKBP1Q8TBC3 AC093512.1-201ENST00000617969 520 ntBASIC17.73■□□□□ 0.43
SHKBP1Q8TBC3 LINC00628-201ENST00000628516 1289 ntBASIC17.73■□□□□ 0.43
SHKBP1Q8TBC3 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
SHKBP1Q8TBC3 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SHKBP1Q8TBC3 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC17.73■□□□□ 0.43
SHKBP1Q8TBC3 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SHKBP1Q8TBC3 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SHKBP1Q8TBC3 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SHKBP1Q8TBC3 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SHKBP1Q8TBC3 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SHKBP1Q8TBC3 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
SHKBP1Q8TBC3 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SHKBP1Q8TBC3 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SHKBP1Q8TBC3 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SHKBP1Q8TBC3 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SHKBP1Q8TBC3 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SHKBP1Q8TBC3 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SHKBP1Q8TBC3 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
SHKBP1Q8TBC3 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC17.72■□□□□ 0.43
SHKBP1Q8TBC3 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SHKBP1Q8TBC3 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
SHKBP1Q8TBC3 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC17.72■□□□□ 0.43
SHKBP1Q8TBC3 SPDYE11-202ENST00000450699 704 ntBASIC17.72■□□□□ 0.43
SHKBP1Q8TBC3 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC17.72■□□□□ 0.43
SHKBP1Q8TBC3 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC17.72■□□□□ 0.43
SHKBP1Q8TBC3 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
SHKBP1Q8TBC3 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC17.72■□□□□ 0.43
SHKBP1Q8TBC3 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC17.72■□□□□ 0.43
SHKBP1Q8TBC3 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC17.72■□□□□ 0.43
SHKBP1Q8TBC3 AC025678.2-201ENST00000562061 970 ntBASIC17.72■□□□□ 0.43
SHKBP1Q8TBC3 SPDYE9P-201ENST00000570642 692 ntBASIC17.72■□□□□ 0.43
SHKBP1Q8TBC3 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC17.72■□□□□ 0.43
SHKBP1Q8TBC3 AC005412.3-201ENST00000580309 715 ntBASIC17.72■□□□□ 0.43
SHKBP1Q8TBC3 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC17.72■□□□□ 0.43
SHKBP1Q8TBC3 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC17.72■□□□□ 0.43
SHKBP1Q8TBC3 SPDYE10P-202ENST00000612005 668 ntBASIC17.72■□□□□ 0.43
SHKBP1Q8TBC3 SPDYE8P-202ENST00000612377 668 ntBASIC17.72■□□□□ 0.43
SHKBP1Q8TBC3 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC17.72■□□□□ 0.43
SHKBP1Q8TBC3 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
SHKBP1Q8TBC3 HCG11-201ENST00000411553 5696 ntBASIC17.72■□□□□ 0.43
SHKBP1Q8TBC3 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
SHKBP1Q8TBC3 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC17.72■□□□□ 0.43
SHKBP1Q8TBC3 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC17.72■□□□□ 0.43
SHKBP1Q8TBC3 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
SHKBP1Q8TBC3 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC17.72■□□□□ 0.43
SHKBP1Q8TBC3 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC17.72■□□□□ 0.43
SHKBP1Q8TBC3 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SHKBP1Q8TBC3 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC17.71■□□□□ 0.43
SHKBP1Q8TBC3 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SHKBP1Q8TBC3 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
SHKBP1Q8TBC3 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
SHKBP1Q8TBC3 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SHKBP1Q8TBC3 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
SHKBP1Q8TBC3 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
SHKBP1Q8TBC3 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SHKBP1Q8TBC3 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SHKBP1Q8TBC3 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SHKBP1Q8TBC3 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
SHKBP1Q8TBC3 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SHKBP1Q8TBC3 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
SHKBP1Q8TBC3 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC17.71■□□□□ 0.43
SHKBP1Q8TBC3 AC009093.7-201ENST00000623853 1223 ntBASIC17.71■□□□□ 0.43
SHKBP1Q8TBC3 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SHKBP1Q8TBC3 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
SHKBP1Q8TBC3 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SHKBP1Q8TBC3 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SHKBP1Q8TBC3 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SHKBP1Q8TBC3 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC17.71■□□□□ 0.43
SHKBP1Q8TBC3 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SHKBP1Q8TBC3 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
SHKBP1Q8TBC3 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
SHKBP1Q8TBC3 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
SHKBP1Q8TBC3 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC17.71■□□□□ 0.43
SHKBP1Q8TBC3 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.42
SHKBP1Q8TBC3 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SHKBP1Q8TBC3 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC17.7■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms