Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
SMARCC2Q8TAQ2 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SMARCC2Q8TAQ2 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
SMARCC2Q8TAQ2 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC19.81■□□□□ 0.76
SMARCC2Q8TAQ2 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
SMARCC2Q8TAQ2 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
SMARCC2Q8TAQ2 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
SMARCC2Q8TAQ2 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
SMARCC2Q8TAQ2 MIR574-201ENST00000385209 96 ntBASIC19.81■□□□□ 0.76
SMARCC2Q8TAQ2 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC19.81■□□□□ 0.76
SMARCC2Q8TAQ2 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC19.81■□□□□ 0.76
SMARCC2Q8TAQ2 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC19.81■□□□□ 0.76
SMARCC2Q8TAQ2 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC19.81■□□□□ 0.76
SMARCC2Q8TAQ2 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
SMARCC2Q8TAQ2 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC19.81■□□□□ 0.76
SMARCC2Q8TAQ2 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
SMARCC2Q8TAQ2 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
SMARCC2Q8TAQ2 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC19.81■□□□□ 0.76
SMARCC2Q8TAQ2 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC19.81■□□□□ 0.76
SMARCC2Q8TAQ2 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC19.81■□□□□ 0.76
SMARCC2Q8TAQ2 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SMARCC2Q8TAQ2 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC19.81■□□□□ 0.76
SMARCC2Q8TAQ2 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SMARCC2Q8TAQ2 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SMARCC2Q8TAQ2 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC19.81■□□□□ 0.76
SMARCC2Q8TAQ2 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC19.81■□□□□ 0.76
SMARCC2Q8TAQ2 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
SMARCC2Q8TAQ2 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC19.8■□□□□ 0.76
SMARCC2Q8TAQ2 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SMARCC2Q8TAQ2 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SMARCC2Q8TAQ2 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC19.8■□□□□ 0.76
SMARCC2Q8TAQ2 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC19.8■□□□□ 0.76
SMARCC2Q8TAQ2 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SMARCC2Q8TAQ2 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
SMARCC2Q8TAQ2 AL391256.1-201ENST00000443260 1855 ntBASIC19.8■□□□□ 0.76
SMARCC2Q8TAQ2 AMT-206ENST00000458307 1860 ntTSL 2 BASIC19.8■□□□□ 0.76
SMARCC2Q8TAQ2 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SMARCC2Q8TAQ2 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC19.8■□□□□ 0.76
SMARCC2Q8TAQ2 KRT8P49-201ENST00000604166 1432 ntBASIC19.8■□□□□ 0.76
SMARCC2Q8TAQ2 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SMARCC2Q8TAQ2 SLC4A1APP2-201ENST00000424054 1259 ntBASIC19.8■□□□□ 0.76
SMARCC2Q8TAQ2 PAWRP1-201ENST00000451083 565 ntBASIC19.8■□□□□ 0.76
SMARCC2Q8TAQ2 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC19.8■□□□□ 0.76
SMARCC2Q8TAQ2 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC19.8■□□□□ 0.76
SMARCC2Q8TAQ2 PIN1-206ENST00000587625 878 ntTSL 2 BASIC19.8■□□□□ 0.76
SMARCC2Q8TAQ2 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC19.8■□□□□ 0.76
SMARCC2Q8TAQ2 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SMARCC2Q8TAQ2 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SMARCC2Q8TAQ2 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
SMARCC2Q8TAQ2 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SMARCC2Q8TAQ2 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC19.8■□□□□ 0.76
SMARCC2Q8TAQ2 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SMARCC2Q8TAQ2 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC19.79■□□□□ 0.76
SMARCC2Q8TAQ2 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
SMARCC2Q8TAQ2 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SMARCC2Q8TAQ2 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SMARCC2Q8TAQ2 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC19.79■□□□□ 0.76
SMARCC2Q8TAQ2 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SMARCC2Q8TAQ2 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC19.79■□□□□ 0.76
SMARCC2Q8TAQ2 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
SMARCC2Q8TAQ2 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SMARCC2Q8TAQ2 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
SMARCC2Q8TAQ2 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC19.79■□□□□ 0.76
SMARCC2Q8TAQ2 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC19.79■□□□□ 0.76
SMARCC2Q8TAQ2 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SMARCC2Q8TAQ2 PMS2P1-201ENST00000431037 1228 ntBASIC19.79■□□□□ 0.76
SMARCC2Q8TAQ2 RPS15P9-201ENST00000494093 319 ntBASIC19.79■□□□□ 0.76
SMARCC2Q8TAQ2 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC19.79■□□□□ 0.76
SMARCC2Q8TAQ2 AC034105.1-201ENST00000563488 319 ntBASIC19.79■□□□□ 0.76
SMARCC2Q8TAQ2 CAND2-206ENST00000626378 333 ntTSL 5 BASIC19.79■□□□□ 0.76
SMARCC2Q8TAQ2 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SMARCC2Q8TAQ2 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SMARCC2Q8TAQ2 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SMARCC2Q8TAQ2 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SMARCC2Q8TAQ2 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC19.79■□□□□ 0.76
SMARCC2Q8TAQ2 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC19.79■□□□□ 0.76
SMARCC2Q8TAQ2 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SMARCC2Q8TAQ2 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SMARCC2Q8TAQ2 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
SMARCC2Q8TAQ2 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
SMARCC2Q8TAQ2 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
SMARCC2Q8TAQ2 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
SMARCC2Q8TAQ2 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC19.79■□□□□ 0.76
SMARCC2Q8TAQ2 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SMARCC2Q8TAQ2 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC19.78■□□□□ 0.76
SMARCC2Q8TAQ2 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
SMARCC2Q8TAQ2 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC19.78■□□□□ 0.76
SMARCC2Q8TAQ2 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC19.78■□□□□ 0.76
SMARCC2Q8TAQ2 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC19.78■□□□□ 0.76
SMARCC2Q8TAQ2 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SMARCC2Q8TAQ2 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC19.78■□□□□ 0.76
SMARCC2Q8TAQ2 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SMARCC2Q8TAQ2 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
SMARCC2Q8TAQ2 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SMARCC2Q8TAQ2 MIR940-201ENST00000401276 94 ntBASIC19.78■□□□□ 0.76
SMARCC2Q8TAQ2 PTCHD3P3-201ENST00000403073 906 ntBASIC19.78■□□□□ 0.76
SMARCC2Q8TAQ2 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC19.78■□□□□ 0.76
SMARCC2Q8TAQ2 AC009947.1-201ENST00000444350 727 ntBASIC19.78■□□□□ 0.76
SMARCC2Q8TAQ2 AC108751.1-201ENST00000490852 363 ntBASIC19.78■□□□□ 0.76
SMARCC2Q8TAQ2 KRT18P58-201ENST00000527480 1120 ntBASIC19.78■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms