Protein–RNA interactions for Protein: Q8NFH5

NUP35, Nucleoporin NUP53, humanhuman

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP35Q8NFH5 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
NUP35Q8NFH5 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC12.69□□□□□ -0.38
NUP35Q8NFH5 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC12.69□□□□□ -0.38
NUP35Q8NFH5 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC12.69□□□□□ -0.38
NUP35Q8NFH5 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC12.69□□□□□ -0.38
NUP35Q8NFH5 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
NUP35Q8NFH5 C1R-202ENST00000536053 2347 ntTSL 2 BASIC12.69□□□□□ -0.38
NUP35Q8NFH5 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC12.69□□□□□ -0.38
NUP35Q8NFH5 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC12.69□□□□□ -0.38
NUP35Q8NFH5 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
NUP35Q8NFH5 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
NUP35Q8NFH5 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
NUP35Q8NFH5 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
NUP35Q8NFH5 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC12.69□□□□□ -0.38
NUP35Q8NFH5 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC12.69□□□□□ -0.38
NUP35Q8NFH5 AC092338.2-201ENST00000568827 1415 ntBASIC12.69□□□□□ -0.38
NUP35Q8NFH5 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC12.69□□□□□ -0.38
NUP35Q8NFH5 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
NUP35Q8NFH5 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
NUP35Q8NFH5 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
NUP35Q8NFH5 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
NUP35Q8NFH5 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC12.69□□□□□ -0.38
NUP35Q8NFH5 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
NUP35Q8NFH5 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
NUP35Q8NFH5 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
NUP35Q8NFH5 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
NUP35Q8NFH5 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
NUP35Q8NFH5 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
NUP35Q8NFH5 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
NUP35Q8NFH5 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
NUP35Q8NFH5 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
NUP35Q8NFH5 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
NUP35Q8NFH5 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
NUP35Q8NFH5 SUPT20HL2-201ENST00000486479 2409 ntBASIC12.68□□□□□ -0.38
NUP35Q8NFH5 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
NUP35Q8NFH5 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
NUP35Q8NFH5 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
NUP35Q8NFH5 GPR89P-201ENST00000407924 1495 ntBASIC12.68□□□□□ -0.38
NUP35Q8NFH5 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
NUP35Q8NFH5 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC12.68□□□□□ -0.38
NUP35Q8NFH5 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
NUP35Q8NFH5 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
NUP35Q8NFH5 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
NUP35Q8NFH5 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
NUP35Q8NFH5 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
NUP35Q8NFH5 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
NUP35Q8NFH5 ENSA-206ENST00000361631 725 ntTSL 2 BASIC12.68□□□□□ -0.38
NUP35Q8NFH5 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
NUP35Q8NFH5 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
NUP35Q8NFH5 TSPY12P-201ENST00000421279 868 ntBASIC12.68□□□□□ -0.38
NUP35Q8NFH5 HLA-J-202ENST00000469281 1241 ntBASIC12.68□□□□□ -0.38
NUP35Q8NFH5 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC12.68□□□□□ -0.38
NUP35Q8NFH5 AP005242.2-201ENST00000580065 1175 ntBASIC12.68□□□□□ -0.38
NUP35Q8NFH5 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC12.68□□□□□ -0.38
NUP35Q8NFH5 AC024563.2-201ENST00000603282 481 ntBASIC12.68□□□□□ -0.38
NUP35Q8NFH5 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC12.68□□□□□ -0.38
NUP35Q8NFH5 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC12.68□□□□□ -0.38
NUP35Q8NFH5 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
NUP35Q8NFH5 ING5-213ENST00000636051 4199 ntTSL 5 BASIC12.68□□□□□ -0.38
NUP35Q8NFH5 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
NUP35Q8NFH5 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
NUP35Q8NFH5 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC12.68□□□□□ -0.38
NUP35Q8NFH5 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
NUP35Q8NFH5 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
NUP35Q8NFH5 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
NUP35Q8NFH5 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
NUP35Q8NFH5 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
NUP35Q8NFH5 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
NUP35Q8NFH5 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
NUP35Q8NFH5 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
NUP35Q8NFH5 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
NUP35Q8NFH5 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
NUP35Q8NFH5 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
NUP35Q8NFH5 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
NUP35Q8NFH5 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC12.67□□□□□ -0.38
NUP35Q8NFH5 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
NUP35Q8NFH5 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
NUP35Q8NFH5 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC12.67□□□□□ -0.38
NUP35Q8NFH5 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
NUP35Q8NFH5 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC12.67□□□□□ -0.38
NUP35Q8NFH5 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
NUP35Q8NFH5 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
NUP35Q8NFH5 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC12.67□□□□□ -0.38
NUP35Q8NFH5 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
NUP35Q8NFH5 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC12.67□□□□□ -0.38
NUP35Q8NFH5 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
NUP35Q8NFH5 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
NUP35Q8NFH5 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
NUP35Q8NFH5 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
NUP35Q8NFH5 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
NUP35Q8NFH5 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC12.67□□□□□ -0.38
NUP35Q8NFH5 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC12.67□□□□□ -0.38
NUP35Q8NFH5 FAM45BP-202ENST00000592932 1624 ntBASIC12.67□□□□□ -0.38
NUP35Q8NFH5 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
NUP35Q8NFH5 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
NUP35Q8NFH5 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
NUP35Q8NFH5 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
NUP35Q8NFH5 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
NUP35Q8NFH5 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
NUP35Q8NFH5 HIST1H2APS4-201ENST00000362070 348 ntBASIC12.67□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms