Protein–RNA interactions for Protein: Q8NDW4

ZNF248, Zinc finger protein 248, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF248Q8NDW4 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC16.19■□□□□ 0.18
ZNF248Q8NDW4 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
ZNF248Q8NDW4 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
ZNF248Q8NDW4 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ZNF248Q8NDW4 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC16.19■□□□□ 0.18
ZNF248Q8NDW4 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
ZNF248Q8NDW4 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC16.19■□□□□ 0.18
ZNF248Q8NDW4 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ZNF248Q8NDW4 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC16.19■□□□□ 0.18
ZNF248Q8NDW4 BAD-202ENST00000394531 631 ntTSL 3 BASIC16.19■□□□□ 0.18
ZNF248Q8NDW4 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC16.19■□□□□ 0.18
ZNF248Q8NDW4 AC140658.5-201ENST00000438532 169 ntBASIC16.19■□□□□ 0.18
ZNF248Q8NDW4 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC16.19■□□□□ 0.18
ZNF248Q8NDW4 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC16.19■□□□□ 0.18
ZNF248Q8NDW4 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC16.19■□□□□ 0.18
ZNF248Q8NDW4 AL512638.1-201ENST00000457493 794 ntBASIC16.19■□□□□ 0.18
ZNF248Q8NDW4 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC16.19■□□□□ 0.18
ZNF248Q8NDW4 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ZNF248Q8NDW4 IGHV3-42-201ENST00000520410 361 ntBASIC16.19■□□□□ 0.18
ZNF248Q8NDW4 BAD-207ENST00000544785 525 ntTSL 3 BASIC16.19■□□□□ 0.18
ZNF248Q8NDW4 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC16.19■□□□□ 0.18
ZNF248Q8NDW4 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
ZNF248Q8NDW4 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ZNF248Q8NDW4 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC16.19■□□□□ 0.18
ZNF248Q8NDW4 LINC02560-201ENST00000596379 459 ntBASIC16.19■□□□□ 0.18
ZNF248Q8NDW4 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC16.19■□□□□ 0.18
ZNF248Q8NDW4 AC099522.2-201ENST00000607001 744 ntBASIC16.19■□□□□ 0.18
ZNF248Q8NDW4 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC16.19■□□□□ 0.18
ZNF248Q8NDW4 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC16.19■□□□□ 0.18
ZNF248Q8NDW4 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ZNF248Q8NDW4 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ZNF248Q8NDW4 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
ZNF248Q8NDW4 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC16.19■□□□□ 0.18
ZNF248Q8NDW4 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
ZNF248Q8NDW4 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ZNF248Q8NDW4 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
ZNF248Q8NDW4 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC16.19■□□□□ 0.18
ZNF248Q8NDW4 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
ZNF248Q8NDW4 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
ZNF248Q8NDW4 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
ZNF248Q8NDW4 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC16.19■□□□□ 0.18
ZNF248Q8NDW4 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
ZNF248Q8NDW4 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
ZNF248Q8NDW4 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
ZNF248Q8NDW4 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
ZNF248Q8NDW4 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ZNF248Q8NDW4 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC16.18■□□□□ 0.18
ZNF248Q8NDW4 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
ZNF248Q8NDW4 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
ZNF248Q8NDW4 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
ZNF248Q8NDW4 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ZNF248Q8NDW4 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC16.18■□□□□ 0.18
ZNF248Q8NDW4 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ZNF248Q8NDW4 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ZNF248Q8NDW4 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ZNF248Q8NDW4 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ZNF248Q8NDW4 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC16.18■□□□□ 0.18
ZNF248Q8NDW4 COQ6-210ENST00000554920 649 ntTSL 3 BASIC16.18■□□□□ 0.18
ZNF248Q8NDW4 AC140878.1-201ENST00000565277 250 ntBASIC16.18■□□□□ 0.18
ZNF248Q8NDW4 AL645728.2-201ENST00000641974 660 ntBASIC16.18■□□□□ 0.18
ZNF248Q8NDW4 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC16.18■□□□□ 0.18
ZNF248Q8NDW4 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC16.18■□□□□ 0.18
ZNF248Q8NDW4 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ZNF248Q8NDW4 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ZNF248Q8NDW4 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ZNF248Q8NDW4 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
ZNF248Q8NDW4 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC16.18■□□□□ 0.18
ZNF248Q8NDW4 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ZNF248Q8NDW4 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ZNF248Q8NDW4 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ZNF248Q8NDW4 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ZNF248Q8NDW4 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
ZNF248Q8NDW4 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ZNF248Q8NDW4 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
ZNF248Q8NDW4 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
ZNF248Q8NDW4 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
ZNF248Q8NDW4 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC16.17■□□□□ 0.18
ZNF248Q8NDW4 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC16.17■□□□□ 0.18
ZNF248Q8NDW4 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
ZNF248Q8NDW4 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ZNF248Q8NDW4 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC16.17■□□□□ 0.18
ZNF248Q8NDW4 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC16.17■□□□□ 0.18
ZNF248Q8NDW4 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
ZNF248Q8NDW4 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
ZNF248Q8NDW4 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
ZNF248Q8NDW4 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
ZNF248Q8NDW4 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
ZNF248Q8NDW4 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC16.17■□□□□ 0.18
ZNF248Q8NDW4 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
ZNF248Q8NDW4 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC16.17■□□□□ 0.18
ZNF248Q8NDW4 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
ZNF248Q8NDW4 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
ZNF248Q8NDW4 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC16.17■□□□□ 0.18
ZNF248Q8NDW4 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC16.17■□□□□ 0.18
ZNF248Q8NDW4 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC16.17■□□□□ 0.18
ZNF248Q8NDW4 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC16.17■□□□□ 0.18
ZNF248Q8NDW4 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
ZNF248Q8NDW4 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC16.17■□□□□ 0.18
ZNF248Q8NDW4 CCDC74BP1-201ENST00000508880 1123 ntBASIC16.17■□□□□ 0.18
ZNF248Q8NDW4 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 58.7 ms