Protein–RNA interactions for Protein: Q8N6Y1

PCDH20, Protocadherin-20, humanhuman

Known RBP Predictions only

Length 951 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH20Q8N6Y1 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC17.3■□□□□ 0.36
PCDH20Q8N6Y1 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDH20Q8N6Y1 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC17.29■□□□□ 0.36
PCDH20Q8N6Y1 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC17.29■□□□□ 0.36
PCDH20Q8N6Y1 AC002310.6-201ENST00000624451 1377 ntBASIC17.29■□□□□ 0.36
PCDH20Q8N6Y1 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDH20Q8N6Y1 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
PCDH20Q8N6Y1 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDH20Q8N6Y1 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC17.29■□□□□ 0.36
PCDH20Q8N6Y1 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC17.29■□□□□ 0.36
PCDH20Q8N6Y1 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDH20Q8N6Y1 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PCDH20Q8N6Y1 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDH20Q8N6Y1 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDH20Q8N6Y1 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
PCDH20Q8N6Y1 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDH20Q8N6Y1 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PCDH20Q8N6Y1 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDH20Q8N6Y1 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDH20Q8N6Y1 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PCDH20Q8N6Y1 CXCL1P1-201ENST00000502804 216 ntBASIC17.29■□□□□ 0.36
PCDH20Q8N6Y1 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
PCDH20Q8N6Y1 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC17.29■□□□□ 0.36
PCDH20Q8N6Y1 CYB561-216ENST00000582297 897 ntTSL 3 BASIC17.29■□□□□ 0.36
PCDH20Q8N6Y1 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDH20Q8N6Y1 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
PCDH20Q8N6Y1 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC17.29■□□□□ 0.36
PCDH20Q8N6Y1 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PCDH20Q8N6Y1 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
PCDH20Q8N6Y1 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
PCDH20Q8N6Y1 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDH20Q8N6Y1 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC17.29■□□□□ 0.36
PCDH20Q8N6Y1 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDH20Q8N6Y1 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDH20Q8N6Y1 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDH20Q8N6Y1 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
PCDH20Q8N6Y1 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PCDH20Q8N6Y1 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDH20Q8N6Y1 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC17.29■□□□□ 0.36
PCDH20Q8N6Y1 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC17.29■□□□□ 0.36
PCDH20Q8N6Y1 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PCDH20Q8N6Y1 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDH20Q8N6Y1 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDH20Q8N6Y1 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC17.28■□□□□ 0.36
PCDH20Q8N6Y1 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDH20Q8N6Y1 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC17.28■□□□□ 0.36
PCDH20Q8N6Y1 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PCDH20Q8N6Y1 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC17.28■□□□□ 0.36
PCDH20Q8N6Y1 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDH20Q8N6Y1 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC17.28■□□□□ 0.36
PCDH20Q8N6Y1 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC17.28■□□□□ 0.36
PCDH20Q8N6Y1 AC004832.2-201ENST00000426397 482 ntBASIC17.28■□□□□ 0.36
PCDH20Q8N6Y1 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC17.28■□□□□ 0.36
PCDH20Q8N6Y1 RHOQP3-201ENST00000437982 621 ntBASIC17.28■□□□□ 0.36
PCDH20Q8N6Y1 FAM185BP-201ENST00000443595 716 ntBASIC17.28■□□□□ 0.36
PCDH20Q8N6Y1 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC17.28■□□□□ 0.36
PCDH20Q8N6Y1 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC17.28■□□□□ 0.36
PCDH20Q8N6Y1 MAL2-202ENST00000531508 892 ntTSL 3 BASIC17.28■□□□□ 0.36
PCDH20Q8N6Y1 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC17.28■□□□□ 0.36
PCDH20Q8N6Y1 AC018845.2-201ENST00000568326 409 ntBASIC17.28■□□□□ 0.36
PCDH20Q8N6Y1 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PCDH20Q8N6Y1 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
PCDH20Q8N6Y1 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDH20Q8N6Y1 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC17.28■□□□□ 0.36
PCDH20Q8N6Y1 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC17.28■□□□□ 0.36
PCDH20Q8N6Y1 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDH20Q8N6Y1 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
PCDH20Q8N6Y1 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC17.28■□□□□ 0.36
PCDH20Q8N6Y1 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PCDH20Q8N6Y1 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC17.27■□□□□ 0.36
PCDH20Q8N6Y1 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC17.27■□□□□ 0.36
PCDH20Q8N6Y1 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PCDH20Q8N6Y1 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PCDH20Q8N6Y1 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC17.27■□□□□ 0.36
PCDH20Q8N6Y1 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC17.27■□□□□ 0.36
PCDH20Q8N6Y1 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC17.27■□□□□ 0.36
PCDH20Q8N6Y1 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
PCDH20Q8N6Y1 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
PCDH20Q8N6Y1 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
PCDH20Q8N6Y1 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PCDH20Q8N6Y1 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC17.27■□□□□ 0.36
PCDH20Q8N6Y1 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
PCDH20Q8N6Y1 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PCDH20Q8N6Y1 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PCDH20Q8N6Y1 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC17.27■□□□□ 0.36
PCDH20Q8N6Y1 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
PCDH20Q8N6Y1 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
PCDH20Q8N6Y1 PMP22-202ENST00000395936 816 ntTSL 3 BASIC17.27■□□□□ 0.36
PCDH20Q8N6Y1 KRT18P13-201ENST00000400056 1290 ntBASIC17.27■□□□□ 0.36
PCDH20Q8N6Y1 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC17.27■□□□□ 0.36
PCDH20Q8N6Y1 AC092865.5-201ENST00000545435 363 ntBASIC17.27■□□□□ 0.36
PCDH20Q8N6Y1 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC17.27■□□□□ 0.36
PCDH20Q8N6Y1 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PCDH20Q8N6Y1 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
PCDH20Q8N6Y1 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC17.27■□□□□ 0.35
PCDH20Q8N6Y1 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC17.27■□□□□ 0.35
PCDH20Q8N6Y1 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
PCDH20Q8N6Y1 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDH20Q8N6Y1 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
PCDH20Q8N6Y1 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 65.5 ms