Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC10.29□□□□□ -0.76
VPS13BQ7Z7G8 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
VPS13BQ7Z7G8 AL671710.1-201ENST00000610245 2349 ntBASIC10.29□□□□□ -0.76
VPS13BQ7Z7G8 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
VPS13BQ7Z7G8 AC073439.1-201ENST00000624121 1774 ntBASIC10.29□□□□□ -0.76
VPS13BQ7Z7G8 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
VPS13BQ7Z7G8 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
VPS13BQ7Z7G8 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC10.29□□□□□ -0.76
VPS13BQ7Z7G8 LINC00895-201ENST00000629028 1637 ntBASIC10.29□□□□□ -0.76
VPS13BQ7Z7G8 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC10.29□□□□□ -0.76
VPS13BQ7Z7G8 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
VPS13BQ7Z7G8 MXI1-205ENST00000393134 889 ntTSL 2 BASIC10.29□□□□□ -0.76
VPS13BQ7Z7G8 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC10.29□□□□□ -0.76
VPS13BQ7Z7G8 MFF-223ENST00000524634 647 ntTSL 2 BASIC10.29□□□□□ -0.76
VPS13BQ7Z7G8 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC10.29□□□□□ -0.76
VPS13BQ7Z7G8 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC10.29□□□□□ -0.76
VPS13BQ7Z7G8 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC10.29□□□□□ -0.76
VPS13BQ7Z7G8 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
VPS13BQ7Z7G8 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
VPS13BQ7Z7G8 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC10.29□□□□□ -0.76
VPS13BQ7Z7G8 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC10.29□□□□□ -0.76
VPS13BQ7Z7G8 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC10.29□□□□□ -0.76
VPS13BQ7Z7G8 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
VPS13BQ7Z7G8 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
VPS13BQ7Z7G8 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
VPS13BQ7Z7G8 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC10.29□□□□□ -0.76
VPS13BQ7Z7G8 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
VPS13BQ7Z7G8 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
VPS13BQ7Z7G8 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
VPS13BQ7Z7G8 AC092068.3-201ENST00000587894 2016 ntBASIC10.29□□□□□ -0.76
VPS13BQ7Z7G8 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC10.29□□□□□ -0.76
VPS13BQ7Z7G8 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
VPS13BQ7Z7G8 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
VPS13BQ7Z7G8 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC10.29□□□□□ -0.76
VPS13BQ7Z7G8 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
VPS13BQ7Z7G8 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
VPS13BQ7Z7G8 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC10.29□□□□□ -0.76
VPS13BQ7Z7G8 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
VPS13BQ7Z7G8 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
VPS13BQ7Z7G8 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC10.29□□□□□ -0.76
VPS13BQ7Z7G8 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
VPS13BQ7Z7G8 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC10.29□□□□□ -0.76
VPS13BQ7Z7G8 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC10.29□□□□□ -0.76
VPS13BQ7Z7G8 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC10.29□□□□□ -0.76
VPS13BQ7Z7G8 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC10.29□□□□□ -0.76
VPS13BQ7Z7G8 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC10.29□□□□□ -0.76
VPS13BQ7Z7G8 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC10.29□□□□□ -0.76
VPS13BQ7Z7G8 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
VPS13BQ7Z7G8 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
VPS13BQ7Z7G8 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
VPS13BQ7Z7G8 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
VPS13BQ7Z7G8 CD81-207ENST00000481687 890 ntTSL 2 BASIC10.29□□□□□ -0.76
VPS13BQ7Z7G8 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC10.29□□□□□ -0.76
VPS13BQ7Z7G8 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC10.29□□□□□ -0.76
VPS13BQ7Z7G8 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC10.29□□□□□ -0.76
VPS13BQ7Z7G8 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC10.29□□□□□ -0.76
VPS13BQ7Z7G8 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC10.29□□□□□ -0.76
VPS13BQ7Z7G8 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC10.29□□□□□ -0.76
VPS13BQ7Z7G8 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC10.29□□□□□ -0.76
VPS13BQ7Z7G8 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
VPS13BQ7Z7G8 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
VPS13BQ7Z7G8 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
VPS13BQ7Z7G8 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
VPS13BQ7Z7G8 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC10.28□□□□□ -0.76
VPS13BQ7Z7G8 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC10.28□□□□□ -0.76
VPS13BQ7Z7G8 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC10.28□□□□□ -0.76
VPS13BQ7Z7G8 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC10.28□□□□□ -0.76
VPS13BQ7Z7G8 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC10.28□□□□□ -0.76
VPS13BQ7Z7G8 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC10.28□□□□□ -0.76
VPS13BQ7Z7G8 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC10.28□□□□□ -0.76
VPS13BQ7Z7G8 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC10.28□□□□□ -0.76
VPS13BQ7Z7G8 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
VPS13BQ7Z7G8 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC10.28□□□□□ -0.76
VPS13BQ7Z7G8 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
VPS13BQ7Z7G8 AC008738.7-201ENST00000609744 511 ntBASIC10.28□□□□□ -0.76
VPS13BQ7Z7G8 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC10.28□□□□□ -0.76
VPS13BQ7Z7G8 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC10.28□□□□□ -0.76
VPS13BQ7Z7G8 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
VPS13BQ7Z7G8 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
VPS13BQ7Z7G8 GRAMD4P3-201ENST00000621665 1669 ntBASIC10.28□□□□□ -0.76
VPS13BQ7Z7G8 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC10.28□□□□□ -0.76
VPS13BQ7Z7G8 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC10.28□□□□□ -0.76
VPS13BQ7Z7G8 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
VPS13BQ7Z7G8 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
VPS13BQ7Z7G8 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC10.28□□□□□ -0.76
VPS13BQ7Z7G8 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC10.28□□□□□ -0.76
VPS13BQ7Z7G8 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC10.28□□□□□ -0.76
VPS13BQ7Z7G8 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
VPS13BQ7Z7G8 PARP8-218ENST00000513738 596 ntTSL 4 BASIC10.28□□□□□ -0.76
VPS13BQ7Z7G8 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC10.28□□□□□ -0.76
VPS13BQ7Z7G8 WASH4P-201ENST00000564273 1246 ntBASIC10.28□□□□□ -0.76
VPS13BQ7Z7G8 RARRES2P9-201ENST00000565168 469 ntBASIC10.28□□□□□ -0.76
VPS13BQ7Z7G8 PRR29-204ENST00000577953 565 ntTSL 4 BASIC10.28□□□□□ -0.76
VPS13BQ7Z7G8 AL512343.1-201ENST00000605837 169 ntBASIC10.28□□□□□ -0.76
VPS13BQ7Z7G8 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC10.28□□□□□ -0.76
VPS13BQ7Z7G8 WT1-AS_2.1-201ENST00000613208 137 ntBASIC10.28□□□□□ -0.76
VPS13BQ7Z7G8 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC10.28□□□□□ -0.76
VPS13BQ7Z7G8 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
VPS13BQ7Z7G8 BTBD7P1-201ENST00000447253 1453 ntBASIC10.28□□□□□ -0.76
VPS13BQ7Z7G8 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Retrieved 100 of 98,524 protein–RNA pairs in 79.4 ms