Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
LYSMD3Q7Z3D4 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
LYSMD3Q7Z3D4 METTL26-205ENST00000397666 726 ntTSL 2 BASIC17.01■□□□□ 0.31
LYSMD3Q7Z3D4 PMS2P1-201ENST00000431037 1228 ntBASIC17.01■□□□□ 0.31
LYSMD3Q7Z3D4 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
LYSMD3Q7Z3D4 TCAP-202ENST00000578283 583 ntTSL 5 BASIC17.01■□□□□ 0.31
LYSMD3Q7Z3D4 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC17.01■□□□□ 0.31
LYSMD3Q7Z3D4 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
LYSMD3Q7Z3D4 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LYSMD3Q7Z3D4 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LYSMD3Q7Z3D4 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
LYSMD3Q7Z3D4 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LYSMD3Q7Z3D4 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LYSMD3Q7Z3D4 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
LYSMD3Q7Z3D4 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
LYSMD3Q7Z3D4 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC17.01■□□□□ 0.31
LYSMD3Q7Z3D4 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC17.01■□□□□ 0.31
LYSMD3Q7Z3D4 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
LYSMD3Q7Z3D4 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC17.01■□□□□ 0.31
LYSMD3Q7Z3D4 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LYSMD3Q7Z3D4 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC17.01■□□□□ 0.31
LYSMD3Q7Z3D4 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
LYSMD3Q7Z3D4 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LYSMD3Q7Z3D4 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LYSMD3Q7Z3D4 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
LYSMD3Q7Z3D4 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC17■□□□□ 0.31
LYSMD3Q7Z3D4 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC17■□□□□ 0.31
LYSMD3Q7Z3D4 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC17■□□□□ 0.31
LYSMD3Q7Z3D4 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC17■□□□□ 0.31
LYSMD3Q7Z3D4 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC17■□□□□ 0.31
LYSMD3Q7Z3D4 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC17■□□□□ 0.31
LYSMD3Q7Z3D4 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC17■□□□□ 0.31
LYSMD3Q7Z3D4 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LYSMD3Q7Z3D4 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC17■□□□□ 0.31
LYSMD3Q7Z3D4 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LYSMD3Q7Z3D4 MIR574-201ENST00000385209 96 ntBASIC17■□□□□ 0.31
LYSMD3Q7Z3D4 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
LYSMD3Q7Z3D4 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
LYSMD3Q7Z3D4 PRSS29P-201ENST00000440800 595 ntBASIC17■□□□□ 0.31
LYSMD3Q7Z3D4 VN2R19P-201ENST00000442399 1052 ntBASIC17■□□□□ 0.31
LYSMD3Q7Z3D4 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
LYSMD3Q7Z3D4 AC107918.2-201ENST00000530817 355 ntBASIC17■□□□□ 0.31
LYSMD3Q7Z3D4 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC17■□□□□ 0.31
LYSMD3Q7Z3D4 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC17■□□□□ 0.31
LYSMD3Q7Z3D4 REXO1L3P-201ENST00000622202 1288 ntBASIC17■□□□□ 0.31
LYSMD3Q7Z3D4 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC17■□□□□ 0.31
LYSMD3Q7Z3D4 CAND2-206ENST00000626378 333 ntTSL 5 BASIC17■□□□□ 0.31
LYSMD3Q7Z3D4 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC17■□□□□ 0.31
LYSMD3Q7Z3D4 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
LYSMD3Q7Z3D4 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC17■□□□□ 0.31
LYSMD3Q7Z3D4 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC17■□□□□ 0.31
LYSMD3Q7Z3D4 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LYSMD3Q7Z3D4 AL021920.2-201ENST00000624828 1351 ntBASIC17■□□□□ 0.31
LYSMD3Q7Z3D4 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LYSMD3Q7Z3D4 PCDHB17P-201ENST00000539533 2393 ntBASIC17■□□□□ 0.31
LYSMD3Q7Z3D4 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
LYSMD3Q7Z3D4 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LYSMD3Q7Z3D4 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC17■□□□□ 0.31
LYSMD3Q7Z3D4 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC17■□□□□ 0.31
LYSMD3Q7Z3D4 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC17■□□□□ 0.31
LYSMD3Q7Z3D4 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
LYSMD3Q7Z3D4 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
LYSMD3Q7Z3D4 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
LYSMD3Q7Z3D4 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
LYSMD3Q7Z3D4 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC16.99■□□□□ 0.31
LYSMD3Q7Z3D4 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC16.99■□□□□ 0.31
LYSMD3Q7Z3D4 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC16.99■□□□□ 0.31
LYSMD3Q7Z3D4 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
LYSMD3Q7Z3D4 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
LYSMD3Q7Z3D4 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LYSMD3Q7Z3D4 AC105020.1-201ENST00000435356 2205 ntBASIC16.99■□□□□ 0.31
LYSMD3Q7Z3D4 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LYSMD3Q7Z3D4 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
LYSMD3Q7Z3D4 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC16.99■□□□□ 0.31
LYSMD3Q7Z3D4 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
LYSMD3Q7Z3D4 CRYGEP-201ENST00000412192 528 ntBASIC16.99■□□□□ 0.31
LYSMD3Q7Z3D4 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
LYSMD3Q7Z3D4 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC16.99■□□□□ 0.31
LYSMD3Q7Z3D4 AC007967.2-201ENST00000432613 625 ntBASIC16.99■□□□□ 0.31
LYSMD3Q7Z3D4 KRT18P58-201ENST00000527480 1120 ntBASIC16.99■□□□□ 0.31
LYSMD3Q7Z3D4 PIN1-206ENST00000587625 878 ntTSL 2 BASIC16.99■□□□□ 0.31
LYSMD3Q7Z3D4 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC16.99■□□□□ 0.31
LYSMD3Q7Z3D4 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
LYSMD3Q7Z3D4 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LYSMD3Q7Z3D4 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
LYSMD3Q7Z3D4 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC16.99■□□□□ 0.31
LYSMD3Q7Z3D4 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
LYSMD3Q7Z3D4 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
LYSMD3Q7Z3D4 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC16.99■□□□□ 0.31
LYSMD3Q7Z3D4 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
LYSMD3Q7Z3D4 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
LYSMD3Q7Z3D4 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LYSMD3Q7Z3D4 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
LYSMD3Q7Z3D4 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
LYSMD3Q7Z3D4 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC16.99■□□□□ 0.31
LYSMD3Q7Z3D4 TUBB8P12-201ENST00000308911 1335 ntBASIC16.98■□□□□ 0.31
LYSMD3Q7Z3D4 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LYSMD3Q7Z3D4 TUBB7P-202ENST00000428444 1305 ntBASIC16.98■□□□□ 0.31
LYSMD3Q7Z3D4 TUBB8P7-204ENST00000567960 1332 ntBASIC16.98■□□□□ 0.31
LYSMD3Q7Z3D4 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms