Protein–RNA interactions for Protein: Q6P161

MRPL54, 39S ribosomal protein L54, mitochondrial, humanhuman

Known RBP Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54Q6P161 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC12.84□□□□□ -0.35
MRPL54Q6P161 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
MRPL54Q6P161 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC12.84□□□□□ -0.35
MRPL54Q6P161 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
MRPL54Q6P161 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
MRPL54Q6P161 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
MRPL54Q6P161 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.35
MRPL54Q6P161 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
MRPL54Q6P161 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
MRPL54Q6P161 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC12.83□□□□□ -0.35
MRPL54Q6P161 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
MRPL54Q6P161 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
MRPL54Q6P161 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
MRPL54Q6P161 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.35
MRPL54Q6P161 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
MRPL54Q6P161 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
MRPL54Q6P161 AC096733.2-201ENST00000609937 1394 ntBASIC12.83□□□□□ -0.36
MRPL54Q6P161 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
MRPL54Q6P161 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
MRPL54Q6P161 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC12.83□□□□□ -0.36
MRPL54Q6P161 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC12.83□□□□□ -0.36
MRPL54Q6P161 HLA-DQB2-231ENST00000435145 2026 ntBASIC12.83□□□□□ -0.36
MRPL54Q6P161 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
MRPL54Q6P161 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
MRPL54Q6P161 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
MRPL54Q6P161 STX3-203ENST00000529177 1571 ntTSL 2 BASIC12.83□□□□□ -0.36
MRPL54Q6P161 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC12.83□□□□□ -0.36
MRPL54Q6P161 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
MRPL54Q6P161 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC12.83□□□□□ -0.36
MRPL54Q6P161 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
MRPL54Q6P161 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC12.83□□□□□ -0.36
MRPL54Q6P161 TSPY6P-201ENST00000448518 926 ntBASIC12.83□□□□□ -0.36
MRPL54Q6P161 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC12.83□□□□□ -0.36
MRPL54Q6P161 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
MRPL54Q6P161 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC12.83□□□□□ -0.36
MRPL54Q6P161 SLC25A1P4-201ENST00000567977 778 ntBASIC12.83□□□□□ -0.36
MRPL54Q6P161 AC233263.1-201ENST00000578059 224 ntBASIC12.83□□□□□ -0.36
MRPL54Q6P161 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC12.83□□□□□ -0.36
MRPL54Q6P161 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC12.83□□□□□ -0.36
MRPL54Q6P161 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
MRPL54Q6P161 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
MRPL54Q6P161 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
MRPL54Q6P161 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
MRPL54Q6P161 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
MRPL54Q6P161 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
MRPL54Q6P161 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC12.83□□□□□ -0.36
MRPL54Q6P161 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC12.83□□□□□ -0.36
MRPL54Q6P161 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
MRPL54Q6P161 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
MRPL54Q6P161 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
MRPL54Q6P161 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
MRPL54Q6P161 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
MRPL54Q6P161 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
MRPL54Q6P161 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
MRPL54Q6P161 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
MRPL54Q6P161 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
MRPL54Q6P161 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC12.83□□□□□ -0.36
MRPL54Q6P161 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
MRPL54Q6P161 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
MRPL54Q6P161 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
MRPL54Q6P161 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
MRPL54Q6P161 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
MRPL54Q6P161 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC12.82□□□□□ -0.36
MRPL54Q6P161 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
MRPL54Q6P161 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
MRPL54Q6P161 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
MRPL54Q6P161 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
MRPL54Q6P161 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
MRPL54Q6P161 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
MRPL54Q6P161 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
MRPL54Q6P161 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
MRPL54Q6P161 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
MRPL54Q6P161 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
MRPL54Q6P161 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
MRPL54Q6P161 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
MRPL54Q6P161 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC12.82□□□□□ -0.36
MRPL54Q6P161 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
MRPL54Q6P161 CA15P1-201ENST00000481698 905 ntBASIC12.82□□□□□ -0.36
MRPL54Q6P161 FDX2-207ENST00000494368 584 ntTSL 4 BASIC12.82□□□□□ -0.36
MRPL54Q6P161 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC12.82□□□□□ -0.36
MRPL54Q6P161 UNC93B5-201ENST00000530315 699 ntBASIC12.82□□□□□ -0.36
MRPL54Q6P161 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
MRPL54Q6P161 CR769767.2-201ENST00000622735 460 ntBASIC12.82□□□□□ -0.36
MRPL54Q6P161 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
MRPL54Q6P161 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC12.82□□□□□ -0.36
MRPL54Q6P161 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
MRPL54Q6P161 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
MRPL54Q6P161 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
MRPL54Q6P161 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
MRPL54Q6P161 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
MRPL54Q6P161 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
MRPL54Q6P161 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC12.82□□□□□ -0.36
MRPL54Q6P161 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
MRPL54Q6P161 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
MRPL54Q6P161 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
MRPL54Q6P161 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
MRPL54Q6P161 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
MRPL54Q6P161 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC12.82□□□□□ -0.36
MRPL54Q6P161 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
MRPL54Q6P161 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC12.81□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms