Protein–RNA interactions for Protein: Q01850

CDR2, Cerebellar degeneration-related protein 2, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2Q01850 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC18.05■□□□□ 0.48
CDR2Q01850 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CDR2Q01850 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDR2Q01850 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDR2Q01850 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC18.05■□□□□ 0.48
CDR2Q01850 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC18.05■□□□□ 0.48
CDR2Q01850 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDR2Q01850 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
CDR2Q01850 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDR2Q01850 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC18.05■□□□□ 0.48
CDR2Q01850 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CDR2Q01850 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC18.05■□□□□ 0.48
CDR2Q01850 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC18.05■□□□□ 0.48
CDR2Q01850 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC18.05■□□□□ 0.48
CDR2Q01850 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CDR2Q01850 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC18.05■□□□□ 0.48
CDR2Q01850 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDR2Q01850 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
CDR2Q01850 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC18.05■□□□□ 0.48
CDR2Q01850 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
CDR2Q01850 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC18.05■□□□□ 0.48
CDR2Q01850 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
CDR2Q01850 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC18.05■□□□□ 0.48
CDR2Q01850 AL805961.1-202ENST00000641562 540 ntBASIC18.05■□□□□ 0.48
CDR2Q01850 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
CDR2Q01850 PC-204ENST00000524491 1714 ntTSL 2 BASIC18.05■□□□□ 0.48
CDR2Q01850 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC18.05■□□□□ 0.48
CDR2Q01850 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDR2Q01850 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDR2Q01850 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CDR2Q01850 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
CDR2Q01850 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CDR2Q01850 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC18.05■□□□□ 0.48
CDR2Q01850 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC18.05■□□□□ 0.48
CDR2Q01850 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDR2Q01850 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDR2Q01850 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDR2Q01850 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC18.05■□□□□ 0.48
CDR2Q01850 TOP3BP1-201ENST00000420768 1380 ntBASIC18.04■□□□□ 0.48
CDR2Q01850 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
CDR2Q01850 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
CDR2Q01850 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
CDR2Q01850 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CDR2Q01850 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC18.04■□□□□ 0.48
CDR2Q01850 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC18.04■□□□□ 0.48
CDR2Q01850 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
CDR2Q01850 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
CDR2Q01850 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CDR2Q01850 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC18.04■□□□□ 0.48
CDR2Q01850 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CDR2Q01850 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC18.04■□□□□ 0.48
CDR2Q01850 DUSP5P1-201ENST00000441325 1139 ntBASIC18.04■□□□□ 0.48
CDR2Q01850 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC18.04■□□□□ 0.48
CDR2Q01850 AC087163.2-201ENST00000457299 853 ntBASIC18.04■□□□□ 0.48
CDR2Q01850 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC18.04■□□□□ 0.48
CDR2Q01850 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC18.04■□□□□ 0.48
CDR2Q01850 TOLLIP-AS1-201ENST00000530897 939 ntBASIC18.04■□□□□ 0.48
CDR2Q01850 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
CDR2Q01850 AC013467.2-201ENST00000605472 835 ntBASIC18.04■□□□□ 0.48
CDR2Q01850 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC18.04■□□□□ 0.48
CDR2Q01850 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CDR2Q01850 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CDR2Q01850 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
CDR2Q01850 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC18.04■□□□□ 0.48
CDR2Q01850 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
CDR2Q01850 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
CDR2Q01850 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC18.04■□□□□ 0.48
CDR2Q01850 PCDHB19P-201ENST00000570871 2371 ntBASIC18.04■□□□□ 0.48
CDR2Q01850 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC18.04■□□□□ 0.48
CDR2Q01850 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
CDR2Q01850 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
CDR2Q01850 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC18.04■□□□□ 0.48
CDR2Q01850 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CDR2Q01850 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
CDR2Q01850 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC18.03■□□□□ 0.48
CDR2Q01850 PI4KAP1-204ENST00000612579 1703 ntBASIC18.03■□□□□ 0.48
CDR2Q01850 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
CDR2Q01850 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC18.03■□□□□ 0.48
CDR2Q01850 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CDR2Q01850 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
CDR2Q01850 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CDR2Q01850 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC18.03■□□□□ 0.48
CDR2Q01850 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CDR2Q01850 AC006277.1-201ENST00000624348 1610 ntBASIC18.03■□□□□ 0.48
CDR2Q01850 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CDR2Q01850 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
CDR2Q01850 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
CDR2Q01850 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC18.03■□□□□ 0.48
CDR2Q01850 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CDR2Q01850 KRT18P27-201ENST00000427733 1299 ntBASIC18.03■□□□□ 0.48
CDR2Q01850 RPS2P1-201ENST00000434010 821 ntBASIC18.03■□□□□ 0.48
CDR2Q01850 EMBP1-201ENST00000458200 901 ntBASIC18.03■□□□□ 0.48
CDR2Q01850 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC18.03■□□□□ 0.48
CDR2Q01850 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC18.03■□□□□ 0.48
CDR2Q01850 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC18.03■□□□□ 0.48
CDR2Q01850 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
CDR2Q01850 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC18.03■□□□□ 0.48
CDR2Q01850 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CDR2Q01850 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC18.03■□□□□ 0.48
CDR2Q01850 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms