Protein–RNA interactions for Protein: Q01118

SCN7A, Sodium channel protein type 7 subunit alpha, humanhuman

Predictions only

Length 1,682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN7AQ01118 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
SCN7AQ01118 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SCN7AQ01118 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC20.75■□□□□ 0.91
SCN7AQ01118 TMEM14DP-201ENST00000422205 345 ntBASIC20.75■□□□□ 0.91
SCN7AQ01118 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC20.75■□□□□ 0.91
SCN7AQ01118 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
SCN7AQ01118 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC20.75■□□□□ 0.91
SCN7AQ01118 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC20.75■□□□□ 0.91
SCN7AQ01118 AC093004.1-201ENST00000508850 424 ntBASIC20.75■□□□□ 0.91
SCN7AQ01118 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC20.75■□□□□ 0.91
SCN7AQ01118 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC20.75■□□□□ 0.91
SCN7AQ01118 AL008721.1-201ENST00000609964 604 ntBASIC20.75■□□□□ 0.91
SCN7AQ01118 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SCN7AQ01118 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
SCN7AQ01118 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SCN7AQ01118 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
SCN7AQ01118 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SCN7AQ01118 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
SCN7AQ01118 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SCN7AQ01118 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SCN7AQ01118 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC20.74■□□□□ 0.91
SCN7AQ01118 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC20.74■□□□□ 0.91
SCN7AQ01118 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SCN7AQ01118 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SCN7AQ01118 MAX-210ENST00000555419 765 ntTSL 5 BASIC20.74■□□□□ 0.91
SCN7AQ01118 NAA38-207ENST00000576861 556 ntTSL 3 BASIC20.74■□□□□ 0.91
SCN7AQ01118 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SCN7AQ01118 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC20.74■□□□□ 0.91
SCN7AQ01118 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC20.74■□□□□ 0.91
SCN7AQ01118 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC20.74■□□□□ 0.91
SCN7AQ01118 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
SCN7AQ01118 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SCN7AQ01118 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SCN7AQ01118 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SCN7AQ01118 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC20.74■□□□□ 0.91
SCN7AQ01118 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SCN7AQ01118 NOC2LP2-201ENST00000407594 1944 ntBASIC20.74■□□□□ 0.91
SCN7AQ01118 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
SCN7AQ01118 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SCN7AQ01118 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
SCN7AQ01118 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
SCN7AQ01118 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SCN7AQ01118 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SCN7AQ01118 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SCN7AQ01118 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
SCN7AQ01118 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SCN7AQ01118 VMO1-203ENST00000416307 712 ntTSL 2 BASIC20.73■□□□□ 0.91
SCN7AQ01118 PTPA-220ENST00000436883 532 ntTSL 4 BASIC20.73■□□□□ 0.91
SCN7AQ01118 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC20.73■□□□□ 0.91
SCN7AQ01118 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC20.73■□□□□ 0.91
SCN7AQ01118 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC20.73■□□□□ 0.91
SCN7AQ01118 AC132938.2-201ENST00000579188 680 ntBASIC20.73■□□□□ 0.91
SCN7AQ01118 AL359881.2-201ENST00000602973 570 ntBASIC20.73■□□□□ 0.91
SCN7AQ01118 AC008494.3-201ENST00000606615 944 ntBASIC20.73■□□□□ 0.91
SCN7AQ01118 AL591163.1-201ENST00000641757 987 ntBASIC20.73■□□□□ 0.91
SCN7AQ01118 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC20.73■□□□□ 0.91
SCN7AQ01118 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SCN7AQ01118 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SCN7AQ01118 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC20.73■□□□□ 0.91
SCN7AQ01118 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC20.73■□□□□ 0.91
SCN7AQ01118 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
SCN7AQ01118 KRT8P12-202ENST00000472924 1397 ntBASIC20.73■□□□□ 0.91
SCN7AQ01118 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC20.73■□□□□ 0.91
SCN7AQ01118 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SCN7AQ01118 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC20.73■□□□□ 0.91
SCN7AQ01118 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC20.73■□□□□ 0.91
SCN7AQ01118 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
SCN7AQ01118 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
SCN7AQ01118 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC20.73■□□□□ 0.91
SCN7AQ01118 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC20.73■□□□□ 0.91
SCN7AQ01118 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
SCN7AQ01118 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC20.73■□□□□ 0.91
SCN7AQ01118 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC20.73■□□□□ 0.91
SCN7AQ01118 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
SCN7AQ01118 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SCN7AQ01118 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
SCN7AQ01118 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SCN7AQ01118 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC20.73■□□□□ 0.91
SCN7AQ01118 AC114501.2-201ENST00000439631 535 ntBASIC20.73■□□□□ 0.91
SCN7AQ01118 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC20.73■□□□□ 0.91
SCN7AQ01118 INE1-201ENST00000456273 945 ntBASIC20.73■□□□□ 0.91
SCN7AQ01118 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC20.73■□□□□ 0.91
SCN7AQ01118 RAB35-202ENST00000534951 939 ntTSL 2 BASIC20.73■□□□□ 0.91
SCN7AQ01118 5S_rRNA.22-201ENST00000614916 106 ntBASIC20.73■□□□□ 0.91
SCN7AQ01118 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
SCN7AQ01118 KRT8P39-201ENST00000396270 1433 ntBASIC20.72■□□□□ 0.91
SCN7AQ01118 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC20.72■□□□□ 0.91
SCN7AQ01118 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC20.72■□□□□ 0.91
SCN7AQ01118 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC20.72■□□□□ 0.91
SCN7AQ01118 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC20.72■□□□□ 0.91
SCN7AQ01118 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SCN7AQ01118 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC20.72■□□□□ 0.91
SCN7AQ01118 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
SCN7AQ01118 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SCN7AQ01118 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SCN7AQ01118 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SCN7AQ01118 RN7SL837P-201ENST00000463010 287 ntBASIC20.72■□□□□ 0.91
SCN7AQ01118 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SCN7AQ01118 AC098859.1-201ENST00000502915 1238 ntBASIC20.72■□□□□ 0.91
SCN7AQ01118 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC20.72■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms