Protein–RNA interactions for Protein: P78527

PRKDC, DNA-dependent protein kinase catalytic subunit, humanhuman

Known RBP Predictions only

Length 4,128 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDCP78527 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
PRKDCP78527 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC12□□□□□ -0.49
PRKDCP78527 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC12□□□□□ -0.49
PRKDCP78527 UFM1-202ENST00000379649 846 ntTSL 4 BASIC12□□□□□ -0.49
PRKDCP78527 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC12□□□□□ -0.49
PRKDCP78527 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC12□□□□□ -0.49
PRKDCP78527 PTPA-217ENST00000434095 870 ntTSL 2 BASIC12□□□□□ -0.49
PRKDCP78527 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC12□□□□□ -0.49
PRKDCP78527 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC12□□□□□ -0.49
PRKDCP78527 AC009041.1-201ENST00000565401 544 ntTSL 4 BASIC12□□□□□ -0.49
PRKDCP78527 AP003419.4-201ENST00000616071 517 ntBASIC12□□□□□ -0.49
PRKDCP78527 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC12□□□□□ -0.49
PRKDCP78527 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC12□□□□□ -0.49
PRKDCP78527 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC12□□□□□ -0.49
PRKDCP78527 TP73-213ENST00000604479 1623 ntTSL 5 BASIC11.99□□□□□ -0.49
PRKDCP78527 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
PRKDCP78527 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
PRKDCP78527 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
PRKDCP78527 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
PRKDCP78527 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC11.99□□□□□ -0.49
PRKDCP78527 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC11.99□□□□□ -0.49
PRKDCP78527 AKR7A2P1-201ENST00000460134 915 ntBASIC11.99□□□□□ -0.49
PRKDCP78527 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC11.99□□□□□ -0.49
PRKDCP78527 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC11.99□□□□□ -0.49
PRKDCP78527 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC11.99□□□□□ -0.49
PRKDCP78527 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC11.99□□□□□ -0.49
PRKDCP78527 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC11.99□□□□□ -0.49
PRKDCP78527 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC11.99□□□□□ -0.49
PRKDCP78527 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
PRKDCP78527 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC11.99□□□□□ -0.49
PRKDCP78527 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC11.99□□□□□ -0.49
PRKDCP78527 HLA-DQB1-201ENST00000374943 1656 ntBASIC11.99□□□□□ -0.49
PRKDCP78527 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
PRKDCP78527 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
PRKDCP78527 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC11.99□□□□□ -0.49
PRKDCP78527 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC11.99□□□□□ -0.49
PRKDCP78527 AC091167.2-201ENST00000579581 588 ntBASIC11.99□□□□□ -0.49
PRKDCP78527 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC11.99□□□□□ -0.49
PRKDCP78527 AC008687.7-202ENST00000637404 953 ntBASIC11.99□□□□□ -0.49
PRKDCP78527 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
PRKDCP78527 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC11.99□□□□□ -0.49
PRKDCP78527 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
PRKDCP78527 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
PRKDCP78527 AL607033.1-201ENST00000623900 1599 ntBASIC11.99□□□□□ -0.49
PRKDCP78527 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
PRKDCP78527 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC11.99□□□□□ -0.49
PRKDCP78527 AC131009.4-201ENST00000624048 1740 ntBASIC11.99□□□□□ -0.49
PRKDCP78527 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
PRKDCP78527 KRT18P66-201ENST00000452970 1269 ntBASIC11.99□□□□□ -0.49
PRKDCP78527 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC11.99□□□□□ -0.49
PRKDCP78527 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC11.99□□□□□ -0.49
PRKDCP78527 GNRHR2-203ENST00000581100 1187 ntBASIC11.99□□□□□ -0.49
PRKDCP78527 AC010328.2-201ENST00000597698 1111 ntBASIC11.99□□□□□ -0.49
PRKDCP78527 AC244669.2-201ENST00000612320 853 ntBASIC11.99□□□□□ -0.49
PRKDCP78527 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC11.99□□□□□ -0.49
PRKDCP78527 AC004461.2-201ENST00000629517 803 ntBASIC11.99□□□□□ -0.49
PRKDCP78527 CASP16P-204ENST00000635032 809 ntBASIC11.99□□□□□ -0.49
PRKDCP78527 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
PRKDCP78527 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC11.99□□□□□ -0.49
PRKDCP78527 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
PRKDCP78527 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC11.99□□□□□ -0.49
PRKDCP78527 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC11.98□□□□□ -0.49
PRKDCP78527 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
PRKDCP78527 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
PRKDCP78527 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
PRKDCP78527 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC11.98□□□□□ -0.49
PRKDCP78527 AC025154.2-203ENST00000550214 1031 ntTSL 2 BASIC11.98□□□□□ -0.49
PRKDCP78527 COX10-AS1-206ENST00000602743 576 ntTSL 5 BASIC11.98□□□□□ -0.49
PRKDCP78527 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC11.98□□□□□ -0.49
PRKDCP78527 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
PRKDCP78527 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
PRKDCP78527 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
PRKDCP78527 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
PRKDCP78527 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
PRKDCP78527 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
PRKDCP78527 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC11.98□□□□□ -0.49
PRKDCP78527 AC004898.1-201ENST00000451057 766 ntBASIC11.98□□□□□ -0.49
PRKDCP78527 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC11.98□□□□□ -0.49
PRKDCP78527 CFL1-214ENST00000534769 758 ntTSL 2 BASIC11.98□□□□□ -0.49
PRKDCP78527 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC11.98□□□□□ -0.49
PRKDCP78527 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC11.98□□□□□ -0.49
PRKDCP78527 AC020914.3-201ENST00000594712 304 ntBASIC11.98□□□□□ -0.49
PRKDCP78527 CR589904.1-202ENST00000611154 660 ntTSL 5 BASIC11.98□□□□□ -0.49
PRKDCP78527 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
PRKDCP78527 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC11.98□□□□□ -0.49
PRKDCP78527 REXO1L9P-201ENST00000604264 2108 ntBASIC11.98□□□□□ -0.49
PRKDCP78527 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC11.98□□□□□ -0.49
PRKDCP78527 CROCCP3-202ENST00000420820 1947 ntBASIC11.98□□□□□ -0.49
PRKDCP78527 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
PRKDCP78527 MSTO2P-201ENST00000314835 1709 ntBASIC11.98□□□□□ -0.49
PRKDCP78527 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
PRKDCP78527 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
PRKDCP78527 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
PRKDCP78527 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
PRKDCP78527 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC11.98□□□□□ -0.49
PRKDCP78527 AC091390.4-201ENST00000484974 491 ntTSL 3 BASIC11.98□□□□□ -0.49
PRKDCP78527 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC11.98□□□□□ -0.49
PRKDCP78527 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC11.98□□□□□ -0.49
PRKDCP78527 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC11.98□□□□□ -0.49
PRKDCP78527 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC11.98□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms