Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
CLRN1P58418 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLRN1P58418 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLRN1P58418 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLRN1P58418 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLRN1P58418 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC15.14■□□□□ 0.01
CLRN1P58418 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC15.14■□□□□ 0.01
CLRN1P58418 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CLRN1P58418 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC15.14■□□□□ 0.01
CLRN1P58418 LAGE3P1-201ENST00000425356 484 ntBASIC15.14■□□□□ 0.01
CLRN1P58418 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC15.14■□□□□ 0.01
CLRN1P58418 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC15.14■□□□□ 0.01
CLRN1P58418 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC15.14■□□□□ 0.01
CLRN1P58418 AC004706.3-202ENST00000621574 984 ntBASIC15.14■□□□□ 0.01
CLRN1P58418 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC15.14■□□□□ 0.01
CLRN1P58418 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLRN1P58418 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC15.14■□□□□ 0.01
CLRN1P58418 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLRN1P58418 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
CLRN1P58418 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC15.14■□□□□ 0.01
CLRN1P58418 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
CLRN1P58418 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLRN1P58418 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CLRN1P58418 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLRN1P58418 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CLRN1P58418 FOS-208ENST00000555686 1496 ntTSL 2 BASIC15.14■□□□□ 0.01
CLRN1P58418 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLRN1P58418 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC15.13■□□□□ 0.01
CLRN1P58418 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLRN1P58418 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC15.13■□□□□ 0.01
CLRN1P58418 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CLRN1P58418 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC15.13■□□□□ 0.01
CLRN1P58418 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLRN1P58418 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC15.13■□□□□ 0.01
CLRN1P58418 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC15.13■□□□□ 0.01
CLRN1P58418 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CLRN1P58418 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLRN1P58418 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLRN1P58418 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
CLRN1P58418 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
CLRN1P58418 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLRN1P58418 DUSP5P1-201ENST00000441325 1139 ntBASIC15.13■□□□□ 0.01
CLRN1P58418 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC15.13■□□□□ 0.01
CLRN1P58418 EMBP1-201ENST00000458200 901 ntBASIC15.13■□□□□ 0.01
CLRN1P58418 ARTN-206ENST00000472435 402 ntTSL 3 BASIC15.13■□□□□ 0.01
CLRN1P58418 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC15.13■□□□□ 0.01
CLRN1P58418 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC15.13■□□□□ 0.01
CLRN1P58418 OR7E14P-202ENST00000530490 1290 ntBASIC15.13■□□□□ 0.01
CLRN1P58418 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC15.13■□□□□ 0.01
CLRN1P58418 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC15.13■□□□□ 0.01
CLRN1P58418 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CLRN1P58418 TERC-201ENST00000602385 541 ntBASIC15.13■□□□□ 0.01
CLRN1P58418 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
CLRN1P58418 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC15.13■□□□□ 0.01
CLRN1P58418 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
CLRN1P58418 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
CLRN1P58418 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CLRN1P58418 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC15.13■□□□□ 0.01
CLRN1P58418 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLRN1P58418 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CLRN1P58418 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLRN1P58418 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLRN1P58418 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLRN1P58418 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CLRN1P58418 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLRN1P58418 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLRN1P58418 AC084018.2-201ENST00000613093 2607 ntBASIC15.13■□□□□ 0.01
CLRN1P58418 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CLRN1P58418 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CLRN1P58418 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
CLRN1P58418 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CLRN1P58418 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
CLRN1P58418 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CLRN1P58418 PCDHB17P-201ENST00000539533 2393 ntBASIC15.12■□□□□ 0.01
CLRN1P58418 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CLRN1P58418 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CLRN1P58418 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CLRN1P58418 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CLRN1P58418 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
CLRN1P58418 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC15.12■□□□□ 0.01
CLRN1P58418 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC15.12■□□□□ 0.01
CLRN1P58418 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC15.12■□□□□ 0.01
CLRN1P58418 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CLRN1P58418 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC15.12■□□□□ 0.01
CLRN1P58418 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC15.12■□□□□ 0.01
CLRN1P58418 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC15.12■□□□□ 0.01
CLRN1P58418 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CLRN1P58418 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC15.12■□□□□ 0.01
CLRN1P58418 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC15.12■□□□□ 0.01
CLRN1P58418 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC15.12■□□□□ 0.01
CLRN1P58418 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC15.12■□□□□ 0.01
CLRN1P58418 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC15.12■□□□□ 0.01
CLRN1P58418 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
CLRN1P58418 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC15.12■□□□□ 0.01
CLRN1P58418 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC15.12■□□□□ 0.01
CLRN1P58418 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC15.12■□□□□ 0.01
CLRN1P58418 ABBA01031661.1-201ENST00000634362 1253 ntBASIC15.12■□□□□ 0.01
CLRN1P58418 AC107918.4-202ENST00000641623 219 ntBASIC15.12■□□□□ 0.01
CLRN1P58418 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CLRN1P58418 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms