Protein–RNA interactions for Protein: P55273

CDKN2D, Cyclin-dependent kinase 4 inhibitor D, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2DP55273 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC16.71■□□□□ 0.27
CDKN2DP55273 EMBP1-201ENST00000458200 901 ntBASIC16.71■□□□□ 0.27
CDKN2DP55273 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC16.71■□□□□ 0.27
CDKN2DP55273 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC16.71■□□□□ 0.27
CDKN2DP55273 SLC25A6P2-201ENST00000497974 877 ntBASIC16.71■□□□□ 0.27
CDKN2DP55273 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC16.71■□□□□ 0.27
CDKN2DP55273 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC16.71■□□□□ 0.27
CDKN2DP55273 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC16.71■□□□□ 0.27
CDKN2DP55273 REXO1L3P-201ENST00000622202 1288 ntBASIC16.71■□□□□ 0.27
CDKN2DP55273 AL805961.1-202ENST00000641562 540 ntBASIC16.71■□□□□ 0.27
CDKN2DP55273 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CDKN2DP55273 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
CDKN2DP55273 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CDKN2DP55273 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CDKN2DP55273 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CDKN2DP55273 AC006538.1-201ENST00000567905 1585 ntBASIC16.71■□□□□ 0.27
CDKN2DP55273 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
CDKN2DP55273 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC16.71■□□□□ 0.27
CDKN2DP55273 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC16.71■□□□□ 0.27
CDKN2DP55273 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CDKN2DP55273 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CDKN2DP55273 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CDKN2DP55273 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC16.71■□□□□ 0.27
CDKN2DP55273 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC16.71■□□□□ 0.26
CDKN2DP55273 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC16.71■□□□□ 0.26
CDKN2DP55273 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC16.7■□□□□ 0.26
CDKN2DP55273 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CDKN2DP55273 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CDKN2DP55273 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC16.7■□□□□ 0.26
CDKN2DP55273 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC16.7■□□□□ 0.26
CDKN2DP55273 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDKN2DP55273 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDKN2DP55273 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CDKN2DP55273 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDKN2DP55273 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC16.7■□□□□ 0.26
CDKN2DP55273 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDKN2DP55273 DOC2GP-204ENST00000639052 2548 ntBASIC16.7■□□□□ 0.26
CDKN2DP55273 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC16.7■□□□□ 0.26
CDKN2DP55273 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDKN2DP55273 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDKN2DP55273 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDKN2DP55273 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC16.7■□□□□ 0.26
CDKN2DP55273 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC16.7■□□□□ 0.26
CDKN2DP55273 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDKN2DP55273 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CDKN2DP55273 KRT18P27-201ENST00000427733 1299 ntBASIC16.7■□□□□ 0.26
CDKN2DP55273 DUSP5P1-201ENST00000441325 1139 ntBASIC16.7■□□□□ 0.26
CDKN2DP55273 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDKN2DP55273 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC16.7■□□□□ 0.26
CDKN2DP55273 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
CDKN2DP55273 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC16.7■□□□□ 0.26
CDKN2DP55273 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC16.7■□□□□ 0.26
CDKN2DP55273 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC16.7■□□□□ 0.26
CDKN2DP55273 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC16.7■□□□□ 0.26
CDKN2DP55273 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
CDKN2DP55273 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC16.7■□□□□ 0.26
CDKN2DP55273 AF228730.7-201ENST00000641842 219 ntBASIC16.7■□□□□ 0.26
CDKN2DP55273 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC16.7■□□□□ 0.26
CDKN2DP55273 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDKN2DP55273 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDKN2DP55273 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDKN2DP55273 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDKN2DP55273 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDKN2DP55273 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDKN2DP55273 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDKN2DP55273 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC16.7■□□□□ 0.26
CDKN2DP55273 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CDKN2DP55273 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
CDKN2DP55273 SNX33P1-201ENST00000592116 1762 ntBASIC16.69■□□□□ 0.26
CDKN2DP55273 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC16.69■□□□□ 0.26
CDKN2DP55273 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CDKN2DP55273 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC16.69■□□□□ 0.26
CDKN2DP55273 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
CDKN2DP55273 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC16.69■□□□□ 0.26
CDKN2DP55273 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC16.69■□□□□ 0.26
CDKN2DP55273 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC16.69■□□□□ 0.26
CDKN2DP55273 AC073621.1-201ENST00000392730 636 ntBASIC16.69■□□□□ 0.26
CDKN2DP55273 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
CDKN2DP55273 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC16.69■□□□□ 0.26
CDKN2DP55273 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC16.69■□□□□ 0.26
CDKN2DP55273 RNPS1P1-201ENST00000507437 918 ntBASIC16.69■□□□□ 0.26
CDKN2DP55273 TOLLIP-AS1-201ENST00000530897 939 ntBASIC16.69■□□□□ 0.26
CDKN2DP55273 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC16.69■□□□□ 0.26
CDKN2DP55273 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
CDKN2DP55273 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC16.69■□□□□ 0.26
CDKN2DP55273 AC006557.2-201ENST00000592985 1240 ntBASIC16.69■□□□□ 0.26
CDKN2DP55273 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CDKN2DP55273 ABBA01031661.1-201ENST00000634362 1253 ntBASIC16.69■□□□□ 0.26
CDKN2DP55273 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC16.69■□□□□ 0.26
CDKN2DP55273 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC16.69■□□□□ 0.26
CDKN2DP55273 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CDKN2DP55273 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
CDKN2DP55273 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CDKN2DP55273 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CDKN2DP55273 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CDKN2DP55273 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC16.69■□□□□ 0.26
CDKN2DP55273 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CDKN2DP55273 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC16.69■□□□□ 0.26
CDKN2DP55273 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CDKN2DP55273 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms