Protein–RNA interactions for Protein: P52701

MSH6, DNA mismatch repair protein Msh6, humanhuman

Predictions only

Length 1,360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6P52701 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC23.14■■□□□ 1.29
MSH6P52701 RNA5SP410-201ENST00000516285 106 ntBASIC23.14■■□□□ 1.29
MSH6P52701 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC23.14■■□□□ 1.29
MSH6P52701 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC23.14■■□□□ 1.29
MSH6P52701 AC015936.2-201ENST00000593177 259 ntBASIC23.14■■□□□ 1.29
MSH6P52701 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC23.14■■□□□ 1.29
MSH6P52701 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC23.14■■□□□ 1.29
MSH6P52701 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC23.14■■□□□ 1.29
MSH6P52701 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC23.14■■□□□ 1.29
MSH6P52701 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC23.14■■□□□ 1.29
MSH6P52701 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
MSH6P52701 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC23.13■■□□□ 1.29
MSH6P52701 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
MSH6P52701 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC23.13■■□□□ 1.29
MSH6P52701 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC23.13■■□□□ 1.29
MSH6P52701 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC23.13■■□□□ 1.29
MSH6P52701 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC23.13■■□□□ 1.29
MSH6P52701 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC23.13■■□□□ 1.29
MSH6P52701 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
MSH6P52701 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
MSH6P52701 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC23.13■■□□□ 1.29
MSH6P52701 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
MSH6P52701 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC23.13■■□□□ 1.29
MSH6P52701 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC23.13■■□□□ 1.29
MSH6P52701 MIR1908-201ENST00000410394 80 ntBASIC23.13■■□□□ 1.29
MSH6P52701 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
MSH6P52701 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
MSH6P52701 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC23.13■■□□□ 1.29
MSH6P52701 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC23.13■■□□□ 1.29
MSH6P52701 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
MSH6P52701 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC23.13■■□□□ 1.29
MSH6P52701 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC23.13■■□□□ 1.29
MSH6P52701 AC023310.3-201ENST00000557027 670 ntBASIC23.13■■□□□ 1.29
MSH6P52701 AC100756.1-201ENST00000562736 682 ntBASIC23.13■■□□□ 1.29
MSH6P52701 AC138749.3-201ENST00000567691 622 ntBASIC23.13■■□□□ 1.29
MSH6P52701 AC116165.1-201ENST00000611806 668 ntBASIC23.13■■□□□ 1.29
MSH6P52701 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC23.12■■□□□ 1.29
MSH6P52701 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC23.12■■□□□ 1.29
MSH6P52701 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
MSH6P52701 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC23.12■■□□□ 1.29
MSH6P52701 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
MSH6P52701 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC23.12■■□□□ 1.29
MSH6P52701 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
MSH6P52701 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC23.12■■□□□ 1.29
MSH6P52701 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC23.12■■□□□ 1.29
MSH6P52701 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC23.12■■□□□ 1.29
MSH6P52701 RBM39-205ENST00000397370 612 ntTSL 2 BASIC23.12■■□□□ 1.29
MSH6P52701 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC23.12■■□□□ 1.29
MSH6P52701 SERBP1P3-201ENST00000459980 809 ntBASIC23.12■■□□□ 1.29
MSH6P52701 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC23.12■■□□□ 1.29
MSH6P52701 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC23.12■■□□□ 1.29
MSH6P52701 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC23.12■■□□□ 1.29
MSH6P52701 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC23.12■■□□□ 1.29
MSH6P52701 AC093726.1-201ENST00000608064 963 ntBASIC23.12■■□□□ 1.29
MSH6P52701 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
MSH6P52701 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC23.12■■□□□ 1.29
MSH6P52701 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
MSH6P52701 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
MSH6P52701 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
MSH6P52701 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC23.12■■□□□ 1.29
MSH6P52701 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
MSH6P52701 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC23.11■■□□□ 1.29
MSH6P52701 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
MSH6P52701 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
MSH6P52701 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
MSH6P52701 AC020907.1-201ENST00000616460 1350 ntBASIC23.11■■□□□ 1.29
MSH6P52701 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC23.11■■□□□ 1.29
MSH6P52701 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
MSH6P52701 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC23.11■■□□□ 1.29
MSH6P52701 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
MSH6P52701 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC23.11■■□□□ 1.29
MSH6P52701 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
MSH6P52701 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC23.11■■□□□ 1.29
MSH6P52701 AC098850.1-201ENST00000419919 790 ntBASIC23.11■■□□□ 1.29
MSH6P52701 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC23.11■■□□□ 1.29
MSH6P52701 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC23.11■■□□□ 1.29
MSH6P52701 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC23.11■■□□□ 1.29
MSH6P52701 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC23.11■■□□□ 1.29
MSH6P52701 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
MSH6P52701 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC23.11■■□□□ 1.29
MSH6P52701 WFDC1-204ENST00000613603 549 ntBASIC23.11■■□□□ 1.29
MSH6P52701 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC23.11■■□□□ 1.29
MSH6P52701 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
MSH6P52701 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
MSH6P52701 NEFHP1-201ENST00000412845 2629 ntBASIC23.11■■□□□ 1.29
MSH6P52701 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
MSH6P52701 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
MSH6P52701 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
MSH6P52701 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC23.1■■□□□ 1.29
MSH6P52701 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC23.1■■□□□ 1.29
MSH6P52701 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC23.1■■□□□ 1.29
MSH6P52701 AC073439.1-201ENST00000624121 1774 ntBASIC23.1■■□□□ 1.29
MSH6P52701 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC23.1■■□□□ 1.29
MSH6P52701 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC23.1■■□□□ 1.29
MSH6P52701 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
MSH6P52701 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
MSH6P52701 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC23.1■■□□□ 1.29
MSH6P52701 MIR4492-201ENST00000581627 80 ntBASIC23.1■■□□□ 1.29
MSH6P52701 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC23.1■■□□□ 1.29
MSH6P52701 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC23.1■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms