Protein–RNA interactions for Protein: P50748

KNTC1, Kinetochore-associated protein 1, humanhuman

Predictions only

Length 2,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1P50748 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
KNTC1P50748 PP14571-201ENST00000404327 934 ntTSL 2 BASIC15.99■□□□□ 0.15
KNTC1P50748 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC15.99■□□□□ 0.15
KNTC1P50748 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC15.99■□□□□ 0.15
KNTC1P50748 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC15.99■□□□□ 0.15
KNTC1P50748 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
KNTC1P50748 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC15.99■□□□□ 0.15
KNTC1P50748 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC15.99■□□□□ 0.15
KNTC1P50748 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
KNTC1P50748 CHCHD2P3-201ENST00000603038 451 ntBASIC15.99■□□□□ 0.15
KNTC1P50748 AL031055.1-201ENST00000606362 631 ntBASIC15.99■□□□□ 0.15
KNTC1P50748 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC15.99■□□□□ 0.15
KNTC1P50748 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
KNTC1P50748 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC15.99■□□□□ 0.15
KNTC1P50748 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
KNTC1P50748 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
KNTC1P50748 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
KNTC1P50748 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC15.99■□□□□ 0.15
KNTC1P50748 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC15.98■□□□□ 0.15
KNTC1P50748 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC15.98■□□□□ 0.15
KNTC1P50748 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
KNTC1P50748 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
KNTC1P50748 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
KNTC1P50748 GRAMD4P3-201ENST00000621665 1669 ntBASIC15.98■□□□□ 0.15
KNTC1P50748 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
KNTC1P50748 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC15.98■□□□□ 0.15
KNTC1P50748 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
KNTC1P50748 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
KNTC1P50748 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC15.98■□□□□ 0.15
KNTC1P50748 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC15.98■□□□□ 0.15
KNTC1P50748 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
KNTC1P50748 AC009407.1-201ENST00000568958 598 ntBASIC15.98■□□□□ 0.15
KNTC1P50748 AC004233.3-201ENST00000607794 1269 ntBASIC15.98■□□□□ 0.15
KNTC1P50748 AC018529.1-201ENST00000613063 361 ntBASIC15.98■□□□□ 0.15
KNTC1P50748 LINC01451-201ENST00000623792 534 ntBASIC15.98■□□□□ 0.15
KNTC1P50748 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC15.98■□□□□ 0.15
KNTC1P50748 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC15.98■□□□□ 0.15
KNTC1P50748 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
KNTC1P50748 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
KNTC1P50748 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
KNTC1P50748 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC15.98■□□□□ 0.15
KNTC1P50748 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
KNTC1P50748 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
KNTC1P50748 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
KNTC1P50748 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
KNTC1P50748 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
KNTC1P50748 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
KNTC1P50748 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
KNTC1P50748 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
KNTC1P50748 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
KNTC1P50748 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC15.98■□□□□ 0.15
KNTC1P50748 SLC22A20-204ENST00000530038 1673 ntBASIC15.98■□□□□ 0.15
KNTC1P50748 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
KNTC1P50748 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
KNTC1P50748 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
KNTC1P50748 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
KNTC1P50748 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
KNTC1P50748 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
KNTC1P50748 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
KNTC1P50748 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC15.98■□□□□ 0.15
KNTC1P50748 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC15.98■□□□□ 0.15
KNTC1P50748 AC009477.1-201ENST00000452936 217 ntBASIC15.98■□□□□ 0.15
KNTC1P50748 GIMAP3P-201ENST00000495150 836 ntBASIC15.98■□□□□ 0.15
KNTC1P50748 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC15.98■□□□□ 0.15
KNTC1P50748 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC15.98■□□□□ 0.15
KNTC1P50748 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC15.98■□□□□ 0.15
KNTC1P50748 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
KNTC1P50748 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC15.98■□□□□ 0.15
KNTC1P50748 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
KNTC1P50748 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
KNTC1P50748 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
KNTC1P50748 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
KNTC1P50748 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
KNTC1P50748 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
KNTC1P50748 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
KNTC1P50748 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC15.97■□□□□ 0.15
KNTC1P50748 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
KNTC1P50748 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
KNTC1P50748 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
KNTC1P50748 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
KNTC1P50748 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC15.97■□□□□ 0.15
KNTC1P50748 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
KNTC1P50748 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
KNTC1P50748 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
KNTC1P50748 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
KNTC1P50748 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
KNTC1P50748 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
KNTC1P50748 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC15.97■□□□□ 0.15
KNTC1P50748 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
KNTC1P50748 AP006294.1-201ENST00000415407 339 ntBASIC15.97■□□□□ 0.15
KNTC1P50748 SPCS2P4-201ENST00000436160 681 ntBASIC15.97■□□□□ 0.15
KNTC1P50748 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC15.97■□□□□ 0.15
KNTC1P50748 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC15.97■□□□□ 0.15
KNTC1P50748 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC15.97■□□□□ 0.15
KNTC1P50748 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC15.97■□□□□ 0.15
KNTC1P50748 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC15.97■□□□□ 0.15
KNTC1P50748 AL355312.1-201ENST00000407115 2176 ntBASIC15.97■□□□□ 0.15
KNTC1P50748 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
KNTC1P50748 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC15.97■□□□□ 0.15
KNTC1P50748 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC15.97■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 65.4 ms