Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
NEDD4P46934 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
NEDD4P46934 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
NEDD4P46934 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
NEDD4P46934 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
NEDD4P46934 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
NEDD4P46934 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
NEDD4P46934 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
NEDD4P46934 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
NEDD4P46934 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
NEDD4P46934 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC19.86■□□□□ 0.77
NEDD4P46934 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
NEDD4P46934 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
NEDD4P46934 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
NEDD4P46934 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
NEDD4P46934 YBX2P1-201ENST00000394192 760 ntBASIC19.86■□□□□ 0.77
NEDD4P46934 PMP22-202ENST00000395936 816 ntTSL 3 BASIC19.86■□□□□ 0.77
NEDD4P46934 ALG1L5P-201ENST00000482043 771 ntBASIC19.86■□□□□ 0.77
NEDD4P46934 SMN2-210ENST00000511812 867 ntTSL 2 BASIC19.86■□□□□ 0.77
NEDD4P46934 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
NEDD4P46934 WT1-AS_2.1-201ENST00000613208 137 ntBASIC19.86■□□□□ 0.77
NEDD4P46934 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
NEDD4P46934 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
NEDD4P46934 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
NEDD4P46934 FLJ38576-201ENST00000623820 2459 ntBASIC19.86■□□□□ 0.77
NEDD4P46934 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
NEDD4P46934 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
NEDD4P46934 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
NEDD4P46934 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
NEDD4P46934 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
NEDD4P46934 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
NEDD4P46934 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
NEDD4P46934 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC19.86■□□□□ 0.77
NEDD4P46934 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC19.86■□□□□ 0.77
NEDD4P46934 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC19.85■□□□□ 0.77
NEDD4P46934 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
NEDD4P46934 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
NEDD4P46934 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
NEDD4P46934 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
NEDD4P46934 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
NEDD4P46934 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
NEDD4P46934 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC19.85■□□□□ 0.77
NEDD4P46934 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC19.85■□□□□ 0.77
NEDD4P46934 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
NEDD4P46934 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC19.85■□□□□ 0.77
NEDD4P46934 BX842568.4-201ENST00000421222 227 ntBASIC19.85■□□□□ 0.77
NEDD4P46934 COX10-202ENST00000429152 875 ntTSL 2 BASIC19.85■□□□□ 0.77
NEDD4P46934 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC19.85■□□□□ 0.77
NEDD4P46934 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC19.85■□□□□ 0.77
NEDD4P46934 AL031432.2-201ENST00000566714 459 ntBASIC19.85■□□□□ 0.77
NEDD4P46934 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
NEDD4P46934 AL928711.1-201ENST00000570165 459 ntBASIC19.85■□□□□ 0.77
NEDD4P46934 AC068137.2-201ENST00000605408 478 ntBASIC19.85■□□□□ 0.77
NEDD4P46934 AC023511.2-201ENST00000618803 211 ntBASIC19.85■□□□□ 0.77
NEDD4P46934 AL645728.2-201ENST00000641974 660 ntBASIC19.85■□□□□ 0.77
NEDD4P46934 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
NEDD4P46934 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
NEDD4P46934 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
NEDD4P46934 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
NEDD4P46934 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
NEDD4P46934 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
NEDD4P46934 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC19.85■□□□□ 0.77
NEDD4P46934 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
NEDD4P46934 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC19.85■□□□□ 0.77
NEDD4P46934 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
NEDD4P46934 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC19.85■□□□□ 0.77
NEDD4P46934 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC19.85■□□□□ 0.77
NEDD4P46934 AMT-206ENST00000458307 1860 ntTSL 2 BASIC19.85■□□□□ 0.77
NEDD4P46934 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
NEDD4P46934 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
NEDD4P46934 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC19.84■□□□□ 0.77
NEDD4P46934 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NEDD4P46934 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
NEDD4P46934 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC19.84■□□□□ 0.77
NEDD4P46934 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NEDD4P46934 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC19.84■□□□□ 0.77
NEDD4P46934 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
NEDD4P46934 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC19.84■□□□□ 0.77
NEDD4P46934 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC19.84■□□□□ 0.77
NEDD4P46934 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
NEDD4P46934 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
NEDD4P46934 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC19.84■□□□□ 0.77
NEDD4P46934 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC19.84■□□□□ 0.77
NEDD4P46934 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC19.84■□□□□ 0.77
NEDD4P46934 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC19.84■□□□□ 0.77
NEDD4P46934 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC19.84■□□□□ 0.77
NEDD4P46934 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
NEDD4P46934 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
NEDD4P46934 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC19.84■□□□□ 0.77
NEDD4P46934 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
NEDD4P46934 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
NEDD4P46934 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC19.84■□□□□ 0.77
NEDD4P46934 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NEDD4P46934 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
NEDD4P46934 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
NEDD4P46934 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
NEDD4P46934 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NEDD4P46934 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC19.84■□□□□ 0.77
NEDD4P46934 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
NEDD4P46934 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms