Protein–RNA interactions for Protein: P26374

CHML, Rab proteins geranylgeranyltransferase component A 2, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMLP26374 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC20.37■□□□□ 0.85
CHMLP26374 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CHMLP26374 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC20.37■□□□□ 0.85
CHMLP26374 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CHMLP26374 MRPL3P1-201ENST00000400109 1033 ntBASIC20.37■□□□□ 0.85
CHMLP26374 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC20.37■□□□□ 0.85
CHMLP26374 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CHMLP26374 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC20.37■□□□□ 0.85
CHMLP26374 AC091167.2-201ENST00000579581 588 ntBASIC20.37■□□□□ 0.85
CHMLP26374 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CHMLP26374 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
CHMLP26374 MIR1199-201ENST00000621445 119 ntBASIC20.37■□□□□ 0.85
CHMLP26374 AC117500.6-201ENST00000624871 588 ntBASIC20.37■□□□□ 0.85
CHMLP26374 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CHMLP26374 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC20.37■□□□□ 0.85
CHMLP26374 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CHMLP26374 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC20.37■□□□□ 0.85
CHMLP26374 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC20.37■□□□□ 0.85
CHMLP26374 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
CHMLP26374 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CHMLP26374 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC20.37■□□□□ 0.85
CHMLP26374 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
CHMLP26374 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC20.37■□□□□ 0.85
CHMLP26374 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CHMLP26374 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
CHMLP26374 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
CHMLP26374 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
CHMLP26374 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CHMLP26374 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CHMLP26374 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
CHMLP26374 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
CHMLP26374 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
CHMLP26374 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CHMLP26374 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
CHMLP26374 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CHMLP26374 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CHMLP26374 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC20.36■□□□□ 0.85
CHMLP26374 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC20.36■□□□□ 0.85
CHMLP26374 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
CHMLP26374 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CHMLP26374 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CHMLP26374 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CHMLP26374 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
CHMLP26374 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CHMLP26374 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC20.36■□□□□ 0.85
CHMLP26374 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC20.36■□□□□ 0.85
CHMLP26374 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC20.36■□□□□ 0.85
CHMLP26374 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CHMLP26374 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC20.36■□□□□ 0.85
CHMLP26374 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC20.36■□□□□ 0.85
CHMLP26374 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
CHMLP26374 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CHMLP26374 PCDH8P1-201ENST00000428983 2773 ntBASIC20.36■□□□□ 0.85
CHMLP26374 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC20.36■□□□□ 0.85
CHMLP26374 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
CHMLP26374 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC20.36■□□□□ 0.85
CHMLP26374 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CHMLP26374 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CHMLP26374 CYP51A1P2-201ENST00000419457 1499 ntBASIC20.36■□□□□ 0.85
CHMLP26374 PC-214ENST00000628663 1470 ntTSL 5 BASIC20.36■□□□□ 0.85
CHMLP26374 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CHMLP26374 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CHMLP26374 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
CHMLP26374 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CHMLP26374 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CHMLP26374 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC20.35■□□□□ 0.85
CHMLP26374 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
CHMLP26374 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
CHMLP26374 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CHMLP26374 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC20.35■□□□□ 0.85
CHMLP26374 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CHMLP26374 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
CHMLP26374 AL031284.1-201ENST00000419297 478 ntBASIC20.35■□□□□ 0.85
CHMLP26374 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC20.35■□□□□ 0.85
CHMLP26374 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC20.35■□□□□ 0.85
CHMLP26374 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CHMLP26374 AC108073.2-201ENST00000464002 357 ntBASIC20.35■□□□□ 0.85
CHMLP26374 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC20.35■□□□□ 0.85
CHMLP26374 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC20.35■□□□□ 0.85
CHMLP26374 CYB561-216ENST00000582297 897 ntTSL 3 BASIC20.35■□□□□ 0.85
CHMLP26374 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC20.35■□□□□ 0.85
CHMLP26374 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC20.35■□□□□ 0.85
CHMLP26374 AL773604.1-201ENST00000617417 272 ntBASIC20.35■□□□□ 0.85
CHMLP26374 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
CHMLP26374 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CHMLP26374 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
CHMLP26374 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CHMLP26374 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CHMLP26374 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC20.35■□□□□ 0.85
CHMLP26374 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC20.35■□□□□ 0.85
CHMLP26374 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC20.35■□□□□ 0.85
CHMLP26374 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC20.35■□□□□ 0.85
CHMLP26374 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC20.35■□□□□ 0.85
CHMLP26374 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC20.35■□□□□ 0.85
CHMLP26374 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CHMLP26374 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC20.34■□□□□ 0.85
CHMLP26374 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC20.34■□□□□ 0.85
CHMLP26374 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
CHMLP26374 AC129492.6-201ENST00000611383 1305 ntBASIC20.34■□□□□ 0.85
CHMLP26374 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC20.34■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms