Protein–RNA interactions for Protein: P24385

CCND1, G1/S-specific cyclin-D1, humanhuman

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1P24385 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCND1P24385 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC17.11■□□□□ 0.33
CCND1P24385 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCND1P24385 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
CCND1P24385 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCND1P24385 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCND1P24385 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
CCND1P24385 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC17.11■□□□□ 0.33
CCND1P24385 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCND1P24385 PC-208ENST00000529047 1607 ntTSL 3 BASIC17.1■□□□□ 0.33
CCND1P24385 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
CCND1P24385 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC17.1■□□□□ 0.33
CCND1P24385 C1R-202ENST00000536053 2347 ntTSL 2 BASIC17.1■□□□□ 0.33
CCND1P24385 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCND1P24385 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCND1P24385 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CCND1P24385 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CCND1P24385 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCND1P24385 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CCND1P24385 REXO1L11P-201ENST00000620964 1927 ntBASIC17.1■□□□□ 0.33
CCND1P24385 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCND1P24385 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CCND1P24385 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
CCND1P24385 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCND1P24385 MYCLP1-201ENST00000372451 1075 ntBASIC17.1■□□□□ 0.33
CCND1P24385 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
CCND1P24385 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCND1P24385 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC17.1■□□□□ 0.33
CCND1P24385 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CCND1P24385 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC17.1■□□□□ 0.33
CCND1P24385 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC17.1■□□□□ 0.33
CCND1P24385 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CCND1P24385 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC17.1■□□□□ 0.33
CCND1P24385 AC093458.2-201ENST00000623150 629 ntBASIC17.1■□□□□ 0.33
CCND1P24385 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CCND1P24385 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCND1P24385 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCND1P24385 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCND1P24385 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC17.1■□□□□ 0.33
CCND1P24385 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCND1P24385 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCND1P24385 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC17.1■□□□□ 0.33
CCND1P24385 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC17.1■□□□□ 0.33
CCND1P24385 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC17.1■□□□□ 0.33
CCND1P24385 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC17.1■□□□□ 0.33
CCND1P24385 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
CCND1P24385 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CCND1P24385 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CCND1P24385 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC17.1■□□□□ 0.33
CCND1P24385 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC17.1■□□□□ 0.33
CCND1P24385 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCND1P24385 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CCND1P24385 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
CCND1P24385 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC17.09■□□□□ 0.33
CCND1P24385 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCND1P24385 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
CCND1P24385 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCND1P24385 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCND1P24385 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
CCND1P24385 POM121L3P-201ENST00000419331 1163 ntBASIC17.09■□□□□ 0.33
CCND1P24385 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC17.09■□□□□ 0.33
CCND1P24385 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCND1P24385 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC17.09■□□□□ 0.33
CCND1P24385 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CCND1P24385 AC074051.2-201ENST00000565115 352 ntBASIC17.09■□□□□ 0.33
CCND1P24385 AP005901.3-202ENST00000581653 237 ntBASIC17.09■□□□□ 0.33
CCND1P24385 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC17.09■□□□□ 0.33
CCND1P24385 AC011467.2-201ENST00000598425 242 ntBASIC17.09■□□□□ 0.33
CCND1P24385 AC092119.3-201ENST00000612618 583 ntBASIC17.09■□□□□ 0.33
CCND1P24385 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
CCND1P24385 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCND1P24385 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CCND1P24385 NSUN5P1-202ENST00000421140 1535 ntBASIC17.09■□□□□ 0.33
CCND1P24385 NSUN5P2-203ENST00000457352 1529 ntBASIC17.09■□□□□ 0.33
CCND1P24385 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CCND1P24385 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC17.09■□□□□ 0.33
CCND1P24385 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
CCND1P24385 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CCND1P24385 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
CCND1P24385 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCND1P24385 MBP-202ENST00000355994 2772 ntTSL 5 BASIC17.09■□□□□ 0.33
CCND1P24385 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
CCND1P24385 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
CCND1P24385 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
CCND1P24385 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CCND1P24385 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCND1P24385 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
CCND1P24385 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CCND1P24385 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CCND1P24385 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CCND1P24385 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.33
CCND1P24385 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CCND1P24385 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC17.08■□□□□ 0.33
CCND1P24385 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CCND1P24385 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CCND1P24385 AL365203.3-201ENST00000609742 2057 ntBASIC17.08■□□□□ 0.33
CCND1P24385 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
CCND1P24385 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
CCND1P24385 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CCND1P24385 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms