Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC16.65■□□□□ 0.26
CDH3P22223 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDH3P22223 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDH3P22223 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC16.65■□□□□ 0.26
CDH3P22223 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
CDH3P22223 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDH3P22223 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDH3P22223 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CDH3P22223 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDH3P22223 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
CDH3P22223 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC16.65■□□□□ 0.26
CDH3P22223 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDH3P22223 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CDH3P22223 AC108751.1-201ENST00000490852 363 ntBASIC16.65■□□□□ 0.26
CDH3P22223 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDH3P22223 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC16.65■□□□□ 0.26
CDH3P22223 AC027601.4-201ENST00000611259 610 ntBASIC16.65■□□□□ 0.26
CDH3P22223 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
CDH3P22223 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
CDH3P22223 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CDH3P22223 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
CDH3P22223 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDH3P22223 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDH3P22223 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDH3P22223 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC16.65■□□□□ 0.26
CDH3P22223 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CDH3P22223 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC16.65■□□□□ 0.26
CDH3P22223 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC16.65■□□□□ 0.26
CDH3P22223 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC16.64■□□□□ 0.26
CDH3P22223 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CDH3P22223 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDH3P22223 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDH3P22223 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
CDH3P22223 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC16.64■□□□□ 0.25
CDH3P22223 PCDHB19P-201ENST00000570871 2371 ntBASIC16.64■□□□□ 0.25
CDH3P22223 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDH3P22223 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CDH3P22223 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
CDH3P22223 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
CDH3P22223 MED15P5-201ENST00000423150 992 ntBASIC16.64■□□□□ 0.25
CDH3P22223 AC009947.1-201ENST00000444350 727 ntBASIC16.64■□□□□ 0.25
CDH3P22223 RPS15P9-201ENST00000494093 319 ntBASIC16.64■□□□□ 0.25
CDH3P22223 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
CDH3P22223 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC16.64■□□□□ 0.25
CDH3P22223 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC16.64■□□□□ 0.25
CDH3P22223 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
CDH3P22223 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDH3P22223 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC16.64■□□□□ 0.25
CDH3P22223 GPR89P-201ENST00000407924 1495 ntBASIC16.64■□□□□ 0.25
CDH3P22223 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC16.64■□□□□ 0.25
CDH3P22223 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC16.64■□□□□ 0.25
CDH3P22223 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
CDH3P22223 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDH3P22223 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
CDH3P22223 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDH3P22223 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC16.64■□□□□ 0.25
CDH3P22223 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.25
CDH3P22223 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDH3P22223 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC16.64■□□□□ 0.25
CDH3P22223 BOC-212ENST00000485230 2173 ntTSL 2 BASIC16.64■□□□□ 0.25
CDH3P22223 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
CDH3P22223 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CDH3P22223 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDH3P22223 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC16.63■□□□□ 0.25
CDH3P22223 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDH3P22223 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDH3P22223 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDH3P22223 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC16.63■□□□□ 0.25
CDH3P22223 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDH3P22223 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC16.63■□□□□ 0.25
CDH3P22223 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC16.63■□□□□ 0.25
CDH3P22223 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
CDH3P22223 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDH3P22223 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDH3P22223 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDH3P22223 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDH3P22223 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC16.63■□□□□ 0.25
CDH3P22223 METTL26-205ENST00000397666 726 ntTSL 2 BASIC16.63■□□□□ 0.25
CDH3P22223 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC16.63■□□□□ 0.25
CDH3P22223 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
CDH3P22223 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
CDH3P22223 AC140113.2-201ENST00000604370 208 ntBASIC16.63■□□□□ 0.25
CDH3P22223 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
CDH3P22223 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC16.63■□□□□ 0.25
CDH3P22223 ABR-203ENST00000536794 2213 ntTSL 2 BASIC16.63■□□□□ 0.25
CDH3P22223 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CDH3P22223 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDH3P22223 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC16.63■□□□□ 0.25
CDH3P22223 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDH3P22223 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CDH3P22223 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDH3P22223 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC16.63■□□□□ 0.25
CDH3P22223 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC16.63■□□□□ 0.25
CDH3P22223 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDH3P22223 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDH3P22223 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CDH3P22223 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
CDH3P22223 AC092850.2-201ENST00000623821 2697 ntBASIC16.63■□□□□ 0.25
CDH3P22223 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CDH3P22223 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms