Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CAPN3P20807 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CAPN3P20807 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CAPN3P20807 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CAPN3P20807 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CAPN3P20807 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC16.34■□□□□ 0.21
CAPN3P20807 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC16.34■□□□□ 0.21
CAPN3P20807 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CAPN3P20807 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC16.34■□□□□ 0.21
CAPN3P20807 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CAPN3P20807 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CAPN3P20807 GCK-202ENST00000345378 2421 ntTSL 2 BASIC16.34■□□□□ 0.21
CAPN3P20807 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
CAPN3P20807 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.21
CAPN3P20807 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
CAPN3P20807 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC16.33■□□□□ 0.21
CAPN3P20807 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
CAPN3P20807 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC16.33■□□□□ 0.21
CAPN3P20807 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC16.33■□□□□ 0.21
CAPN3P20807 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
CAPN3P20807 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
CAPN3P20807 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
CAPN3P20807 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
CAPN3P20807 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CAPN3P20807 KRT18P13-201ENST00000400056 1290 ntBASIC16.33■□□□□ 0.2
CAPN3P20807 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC16.33■□□□□ 0.2
CAPN3P20807 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC16.33■□□□□ 0.2
CAPN3P20807 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CAPN3P20807 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC16.33■□□□□ 0.2
CAPN3P20807 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC16.33■□□□□ 0.2
CAPN3P20807 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC16.33■□□□□ 0.2
CAPN3P20807 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC16.33■□□□□ 0.2
CAPN3P20807 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
CAPN3P20807 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC16.33■□□□□ 0.2
CAPN3P20807 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CAPN3P20807 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CAPN3P20807 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CAPN3P20807 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CAPN3P20807 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC16.33■□□□□ 0.2
CAPN3P20807 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
CAPN3P20807 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC16.33■□□□□ 0.2
CAPN3P20807 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CAPN3P20807 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC16.33■□□□□ 0.2
CAPN3P20807 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC16.33■□□□□ 0.2
CAPN3P20807 AMT-206ENST00000458307 1860 ntTSL 2 BASIC16.33■□□□□ 0.2
CAPN3P20807 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC16.33■□□□□ 0.2
CAPN3P20807 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CAPN3P20807 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CAPN3P20807 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CAPN3P20807 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC16.33■□□□□ 0.2
CAPN3P20807 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CAPN3P20807 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
CAPN3P20807 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CAPN3P20807 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CAPN3P20807 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CAPN3P20807 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CAPN3P20807 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
CAPN3P20807 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CAPN3P20807 TUBB8P12-201ENST00000308911 1335 ntBASIC16.32■□□□□ 0.2
CAPN3P20807 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC16.32■□□□□ 0.2
CAPN3P20807 AC003669.1-201ENST00000334569 611 ntBASIC16.32■□□□□ 0.2
CAPN3P20807 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CAPN3P20807 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CAPN3P20807 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CAPN3P20807 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC16.32■□□□□ 0.2
CAPN3P20807 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CAPN3P20807 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
CAPN3P20807 TEX30-205ENST00000376029 959 ntTSL 2 BASIC16.32■□□□□ 0.2
CAPN3P20807 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC16.32■□□□□ 0.2
CAPN3P20807 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CAPN3P20807 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC16.32■□□□□ 0.2
CAPN3P20807 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC16.32■□□□□ 0.2
CAPN3P20807 TSPY22P-201ENST00000427496 604 ntBASIC16.32■□□□□ 0.2
CAPN3P20807 RPP21-221ENST00000428040 594 ntTSL 2 BASIC16.32■□□□□ 0.2
CAPN3P20807 TUBB7P-202ENST00000428444 1305 ntBASIC16.32■□□□□ 0.2
CAPN3P20807 PMS2P1-201ENST00000431037 1228 ntBASIC16.32■□□□□ 0.2
CAPN3P20807 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CAPN3P20807 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
CAPN3P20807 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC16.32■□□□□ 0.2
CAPN3P20807 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CAPN3P20807 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC16.32■□□□□ 0.2
CAPN3P20807 AC079776.4-201ENST00000511039 504 ntBASIC16.32■□□□□ 0.2
CAPN3P20807 AP002490.2-201ENST00000524791 560 ntBASIC16.32■□□□□ 0.2
CAPN3P20807 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC16.32■□□□□ 0.2
CAPN3P20807 TUBB8P7-204ENST00000567960 1332 ntBASIC16.32■□□□□ 0.2
CAPN3P20807 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
CAPN3P20807 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
CAPN3P20807 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC16.32■□□□□ 0.2
CAPN3P20807 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CAPN3P20807 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC16.32■□□□□ 0.2
CAPN3P20807 BX640515.1-201ENST00000617215 977 ntBASIC16.32■□□□□ 0.2
CAPN3P20807 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC16.32■□□□□ 0.2
CAPN3P20807 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
CAPN3P20807 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CAPN3P20807 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CAPN3P20807 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CAPN3P20807 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC16.32■□□□□ 0.2
CAPN3P20807 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CAPN3P20807 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
CAPN3P20807 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 77.4 ms