Protein–RNA interactions for Protein: P20338

RAB4A, Ras-related protein Rab-4A, humanhuman

Predictions only

Length 218 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4AP20338 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RAB4AP20338 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RAB4AP20338 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RAB4AP20338 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RAB4AP20338 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
RAB4AP20338 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RAB4AP20338 AC036111.1-201ENST00000533973 1582 ntBASIC13.03□□□□□ -0.32
RAB4AP20338 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
RAB4AP20338 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
RAB4AP20338 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC13.02□□□□□ -0.32
RAB4AP20338 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC13.02□□□□□ -0.32
RAB4AP20338 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
RAB4AP20338 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
RAB4AP20338 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
RAB4AP20338 MIR193BHG-211ENST00000641433 5365 ntBASIC13.02□□□□□ -0.32
RAB4AP20338 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
RAB4AP20338 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
RAB4AP20338 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC13.02□□□□□ -0.32
RAB4AP20338 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
RAB4AP20338 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
RAB4AP20338 NAA15-201ENST00000296543 6222 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
RAB4AP20338 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
RAB4AP20338 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
RAB4AP20338 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
RAB4AP20338 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC13.02□□□□□ -0.33
RAB4AP20338 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
RAB4AP20338 FAM207BP-201ENST00000447172 505 ntBASIC13.02□□□□□ -0.33
RAB4AP20338 AC008040.2-201ENST00000461049 708 ntBASIC13.02□□□□□ -0.33
RAB4AP20338 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC13.02□□□□□ -0.33
RAB4AP20338 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
RAB4AP20338 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
RAB4AP20338 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
RAB4AP20338 ABBA01031674.1-201ENST00000635145 728 ntBASIC13.02□□□□□ -0.33
RAB4AP20338 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
RAB4AP20338 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
RAB4AP20338 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
RAB4AP20338 CNTN2-201ENST00000331830 7999 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
RAB4AP20338 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
RAB4AP20338 SLC9A7P1-201ENST00000554295 3311 ntBASIC13.02□□□□□ -0.33
RAB4AP20338 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
RAB4AP20338 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
RAB4AP20338 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
RAB4AP20338 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
RAB4AP20338 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC13.02□□□□□ -0.33
RAB4AP20338 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC13.02□□□□□ -0.33
RAB4AP20338 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
RAB4AP20338 DISP3-201ENST00000294484 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
RAB4AP20338 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
RAB4AP20338 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
RAB4AP20338 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC13.02□□□□□ -0.33
RAB4AP20338 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
RAB4AP20338 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
RAB4AP20338 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC13.02□□□□□ -0.33
RAB4AP20338 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
RAB4AP20338 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
RAB4AP20338 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
RAB4AP20338 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC13.01□□□□□ -0.33
RAB4AP20338 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC13.01□□□□□ -0.33
RAB4AP20338 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
RAB4AP20338 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
RAB4AP20338 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
RAB4AP20338 GRIP2-204ENST00000619221 7977 ntAPPRIS P5 TSL 5 BASIC13.01□□□□□ -0.33
RAB4AP20338 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
RAB4AP20338 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
RAB4AP20338 AL391807.1-203ENST00000604392 2365 ntBASIC13.01□□□□□ -0.33
RAB4AP20338 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
RAB4AP20338 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
RAB4AP20338 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
RAB4AP20338 USP9X-202ENST00000378308 8371 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
RAB4AP20338 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC13.01□□□□□ -0.33
RAB4AP20338 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
RAB4AP20338 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
RAB4AP20338 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
RAB4AP20338 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
RAB4AP20338 KRASP1-201ENST00000407852 552 ntBASIC13.01□□□□□ -0.33
RAB4AP20338 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
RAB4AP20338 RPS2P4-201ENST00000476944 856 ntBASIC13.01□□□□□ -0.33
RAB4AP20338 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC13.01□□□□□ -0.33
RAB4AP20338 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC13.01□□□□□ -0.33
RAB4AP20338 AC098934.4-201ENST00000564127 592 ntBASIC13.01□□□□□ -0.33
RAB4AP20338 AL138781.1-201ENST00000566567 1274 ntBASIC13.01□□□□□ -0.33
RAB4AP20338 NAT14-202ENST00000587400 416 ntTSL 5 BASIC13.01□□□□□ -0.33
RAB4AP20338 AC130371.2-201ENST00000619443 611 ntBASIC13.01□□□□□ -0.33
RAB4AP20338 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
RAB4AP20338 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
RAB4AP20338 MPLKIP-201ENST00000306984 7668 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
RAB4AP20338 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
RAB4AP20338 FAM120C-202ENST00000375180 8057 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
RAB4AP20338 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC13.01□□□□□ -0.33
RAB4AP20338 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
RAB4AP20338 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
RAB4AP20338 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
RAB4AP20338 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
RAB4AP20338 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
RAB4AP20338 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
RAB4AP20338 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC13.01□□□□□ -0.33
RAB4AP20338 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC13.01□□□□□ -0.33
RAB4AP20338 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC13.01□□□□□ -0.33
RAB4AP20338 AC004817.3-201ENST00000602957 2129 ntBASIC13.01□□□□□ -0.33
RAB4AP20338 MGRN1-203ENST00000415496 6405 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms