Protein–RNA interactions for Protein: P0C6S8

LINGO3, Leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 3, humanhuman

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINGO3P0C6S8 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
LINGO3P0C6S8 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
LINGO3P0C6S8 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC16.44■□□□□ 0.22
LINGO3P0C6S8 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
LINGO3P0C6S8 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC16.44■□□□□ 0.22
LINGO3P0C6S8 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LINGO3P0C6S8 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
LINGO3P0C6S8 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC16.43■□□□□ 0.22
LINGO3P0C6S8 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
LINGO3P0C6S8 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LINGO3P0C6S8 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
LINGO3P0C6S8 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LINGO3P0C6S8 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
LINGO3P0C6S8 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LINGO3P0C6S8 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
LINGO3P0C6S8 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC16.43■□□□□ 0.22
LINGO3P0C6S8 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
LINGO3P0C6S8 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
LINGO3P0C6S8 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
LINGO3P0C6S8 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
LINGO3P0C6S8 ARMC10P1-201ENST00000313754 855 ntBASIC16.43■□□□□ 0.22
LINGO3P0C6S8 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
LINGO3P0C6S8 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LINGO3P0C6S8 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
LINGO3P0C6S8 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LINGO3P0C6S8 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC16.43■□□□□ 0.22
LINGO3P0C6S8 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC16.43■□□□□ 0.22
LINGO3P0C6S8 KRT18P65-201ENST00000439811 1286 ntBASIC16.43■□□□□ 0.22
LINGO3P0C6S8 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
LINGO3P0C6S8 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
LINGO3P0C6S8 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC16.43■□□□□ 0.22
LINGO3P0C6S8 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC16.43■□□□□ 0.22
LINGO3P0C6S8 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC16.43■□□□□ 0.22
LINGO3P0C6S8 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC16.43■□□□□ 0.22
LINGO3P0C6S8 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC16.43■□□□□ 0.22
LINGO3P0C6S8 AL390719.2-201ENST00000606993 987 ntBASIC16.43■□□□□ 0.22
LINGO3P0C6S8 GXYLT1P4-201ENST00000613576 1192 ntBASIC16.43■□□□□ 0.22
LINGO3P0C6S8 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC16.43■□□□□ 0.22
LINGO3P0C6S8 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
LINGO3P0C6S8 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
LINGO3P0C6S8 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
LINGO3P0C6S8 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LINGO3P0C6S8 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC16.43■□□□□ 0.22
LINGO3P0C6S8 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LINGO3P0C6S8 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LINGO3P0C6S8 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
LINGO3P0C6S8 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
LINGO3P0C6S8 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LINGO3P0C6S8 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC16.43■□□□□ 0.22
LINGO3P0C6S8 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC16.43■□□□□ 0.22
LINGO3P0C6S8 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
LINGO3P0C6S8 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC16.43■□□□□ 0.22
LINGO3P0C6S8 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
LINGO3P0C6S8 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
LINGO3P0C6S8 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
LINGO3P0C6S8 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LINGO3P0C6S8 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
LINGO3P0C6S8 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC16.42■□□□□ 0.22
LINGO3P0C6S8 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
LINGO3P0C6S8 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC16.42■□□□□ 0.22
LINGO3P0C6S8 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LINGO3P0C6S8 Z83836.1-201ENST00000624605 1642 ntBASIC16.42■□□□□ 0.22
LINGO3P0C6S8 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LINGO3P0C6S8 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LINGO3P0C6S8 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
LINGO3P0C6S8 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LINGO3P0C6S8 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC16.42■□□□□ 0.22
LINGO3P0C6S8 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LINGO3P0C6S8 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
LINGO3P0C6S8 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LINGO3P0C6S8 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC16.42■□□□□ 0.22
LINGO3P0C6S8 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
LINGO3P0C6S8 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC16.42■□□□□ 0.22
LINGO3P0C6S8 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC16.42■□□□□ 0.22
LINGO3P0C6S8 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC16.42■□□□□ 0.22
LINGO3P0C6S8 CNP-204ENST00000472031 1019 ntTSL 2 BASIC16.42■□□□□ 0.22
LINGO3P0C6S8 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC16.42■□□□□ 0.22
LINGO3P0C6S8 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC16.42■□□□□ 0.22
LINGO3P0C6S8 NDUFV2-AS1-203ENST00000608008 779 ntBASIC16.42■□□□□ 0.22
LINGO3P0C6S8 AC116407.4-201ENST00000623319 1061 ntBASIC16.42■□□□□ 0.22
LINGO3P0C6S8 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LINGO3P0C6S8 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC16.42■□□□□ 0.22
LINGO3P0C6S8 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LINGO3P0C6S8 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
LINGO3P0C6S8 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LINGO3P0C6S8 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
LINGO3P0C6S8 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LINGO3P0C6S8 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC16.42■□□□□ 0.22
LINGO3P0C6S8 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
LINGO3P0C6S8 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC16.42■□□□□ 0.22
LINGO3P0C6S8 R3HDM2P2-201ENST00000401880 2116 ntBASIC16.42■□□□□ 0.22
LINGO3P0C6S8 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
LINGO3P0C6S8 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LINGO3P0C6S8 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
LINGO3P0C6S8 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC16.41■□□□□ 0.22
LINGO3P0C6S8 OR6D1P-203ENST00000641209 4860 ntBASIC16.41■□□□□ 0.22
LINGO3P0C6S8 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
LINGO3P0C6S8 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
LINGO3P0C6S8 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LINGO3P0C6S8 AL353692.3-201ENST00000407031 1396 ntBASIC16.41■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms