Protein–RNA interactions for Protein: P09017

HOXC4, Homeobox protein Hox-C4, humanhuman

Predicted RBP Predictions only

Length 264 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4P09017 AL391256.1-201ENST00000443260 1855 ntBASIC16.41■□□□□ 0.22
HOXC4P09017 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HOXC4P09017 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
HOXC4P09017 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HOXC4P09017 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
HOXC4P09017 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HOXC4P09017 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
HOXC4P09017 AC020916.1-201ENST00000587762 1774 ntBASIC16.41■□□□□ 0.22
HOXC4P09017 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC16.41■□□□□ 0.22
HOXC4P09017 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
HOXC4P09017 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
HOXC4P09017 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC16.41■□□□□ 0.22
HOXC4P09017 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC16.41■□□□□ 0.22
HOXC4P09017 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HOXC4P09017 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC16.4■□□□□ 0.22
HOXC4P09017 UXT-AS1-201ENST00000590504 1525 ntBASIC16.4■□□□□ 0.22
HOXC4P09017 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HOXC4P09017 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HOXC4P09017 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HOXC4P09017 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
HOXC4P09017 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HOXC4P09017 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC16.4■□□□□ 0.22
HOXC4P09017 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
HOXC4P09017 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
HOXC4P09017 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
HOXC4P09017 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
HOXC4P09017 PC-204ENST00000524491 1714 ntTSL 2 BASIC16.4■□□□□ 0.22
HOXC4P09017 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HOXC4P09017 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
HOXC4P09017 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HOXC4P09017 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HOXC4P09017 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC16.4■□□□□ 0.22
HOXC4P09017 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC16.4■□□□□ 0.22
HOXC4P09017 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
HOXC4P09017 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC16.4■□□□□ 0.22
HOXC4P09017 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC16.4■□□□□ 0.22
HOXC4P09017 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HOXC4P09017 AC105233.2-201ENST00000523697 349 ntBASIC16.4■□□□□ 0.22
HOXC4P09017 AF228730.5-201ENST00000530288 346 ntBASIC16.4■□□□□ 0.22
HOXC4P09017 RPL28-205ENST00000558131 444 ntTSL 5 BASIC16.4■□□□□ 0.22
HOXC4P09017 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC16.4■□□□□ 0.22
HOXC4P09017 RPS15-212ENST00000593052 629 ntTSL 2 BASIC16.4■□□□□ 0.22
HOXC4P09017 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC16.4■□□□□ 0.22
HOXC4P09017 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
HOXC4P09017 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
HOXC4P09017 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
HOXC4P09017 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HOXC4P09017 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
HOXC4P09017 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HOXC4P09017 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
HOXC4P09017 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
HOXC4P09017 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC16.39■□□□□ 0.22
HOXC4P09017 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
HOXC4P09017 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HOXC4P09017 AL645608.8-201ENST00000606034 2086 ntBASIC16.39■□□□□ 0.21
HOXC4P09017 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HOXC4P09017 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HOXC4P09017 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
HOXC4P09017 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
HOXC4P09017 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
HOXC4P09017 BANP-227ENST00000626016 2144 ntTSL 2 BASIC16.39■□□□□ 0.21
HOXC4P09017 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HOXC4P09017 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
HOXC4P09017 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
HOXC4P09017 AC067863.1-201ENST00000494933 530 ntBASIC16.39■□□□□ 0.21
HOXC4P09017 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC16.39■□□□□ 0.21
HOXC4P09017 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC16.39■□□□□ 0.21
HOXC4P09017 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HOXC4P09017 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
HOXC4P09017 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
HOXC4P09017 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC16.39■□□□□ 0.21
HOXC4P09017 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC16.39■□□□□ 0.21
HOXC4P09017 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC16.39■□□□□ 0.21
HOXC4P09017 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
HOXC4P09017 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
HOXC4P09017 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HOXC4P09017 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC16.39■□□□□ 0.21
HOXC4P09017 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC16.39■□□□□ 0.21
HOXC4P09017 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HOXC4P09017 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC16.39■□□□□ 0.21
HOXC4P09017 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
HOXC4P09017 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
HOXC4P09017 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
HOXC4P09017 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
HOXC4P09017 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
HOXC4P09017 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HOXC4P09017 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HOXC4P09017 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
HOXC4P09017 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
HOXC4P09017 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
HOXC4P09017 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HOXC4P09017 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC16.38■□□□□ 0.21
HOXC4P09017 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HOXC4P09017 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC16.38■□□□□ 0.21
HOXC4P09017 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
HOXC4P09017 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
HOXC4P09017 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC16.38■□□□□ 0.21
HOXC4P09017 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
HOXC4P09017 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
HOXC4P09017 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms