Protein–RNA interactions for Protein: P08253

MMP2, 72 kDa type IV collagenase, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP2P08253 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
MMP2P08253 AC006538.1-201ENST00000567905 1585 ntBASIC16.99■□□□□ 0.31
MMP2P08253 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
MMP2P08253 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
MMP2P08253 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC16.99■□□□□ 0.31
MMP2P08253 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
MMP2P08253 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
MMP2P08253 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
MMP2P08253 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
MMP2P08253 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
MMP2P08253 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
MMP2P08253 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
MMP2P08253 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
MMP2P08253 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
MMP2P08253 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
MMP2P08253 DDT-204ENST00000404092 805 ntTSL 3 BASIC16.99■□□□□ 0.31
MMP2P08253 HCG4-201ENST00000418983 998 ntBASIC16.99■□□□□ 0.31
MMP2P08253 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC16.99■□□□□ 0.31
MMP2P08253 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC16.99■□□□□ 0.31
MMP2P08253 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC16.99■□□□□ 0.31
MMP2P08253 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC16.99■□□□□ 0.31
MMP2P08253 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC16.99■□□□□ 0.31
MMP2P08253 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
MMP2P08253 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC16.99■□□□□ 0.31
MMP2P08253 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
MMP2P08253 AC087641.1-201ENST00000557561 1021 ntBASIC16.99■□□□□ 0.31
MMP2P08253 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC16.99■□□□□ 0.31
MMP2P08253 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC16.99■□□□□ 0.31
MMP2P08253 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
MMP2P08253 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
MMP2P08253 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
MMP2P08253 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
MMP2P08253 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC16.99■□□□□ 0.31
MMP2P08253 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
MMP2P08253 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
MMP2P08253 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
MMP2P08253 ZNF259P1-201ENST00000407656 1365 ntBASIC16.99■□□□□ 0.31
MMP2P08253 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC16.99■□□□□ 0.31
MMP2P08253 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC16.99■□□□□ 0.31
MMP2P08253 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
MMP2P08253 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC16.98■□□□□ 0.31
MMP2P08253 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
MMP2P08253 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
MMP2P08253 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
MMP2P08253 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC16.98■□□□□ 0.31
MMP2P08253 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
MMP2P08253 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
MMP2P08253 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
MMP2P08253 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
MMP2P08253 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
MMP2P08253 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
MMP2P08253 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
MMP2P08253 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
MMP2P08253 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
MMP2P08253 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
MMP2P08253 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC16.98■□□□□ 0.31
MMP2P08253 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
MMP2P08253 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC16.98■□□□□ 0.31
MMP2P08253 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC16.98■□□□□ 0.31
MMP2P08253 AC018845.2-201ENST00000568326 409 ntBASIC16.98■□□□□ 0.31
MMP2P08253 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
MMP2P08253 MIR4515-201ENST00000584082 81 ntBASIC16.98■□□□□ 0.31
MMP2P08253 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC16.98■□□□□ 0.31
MMP2P08253 SIGLEC29P-201ENST00000599873 1114 ntBASIC16.98■□□□□ 0.31
MMP2P08253 AC140113.2-201ENST00000604370 208 ntBASIC16.98■□□□□ 0.31
MMP2P08253 WT1-AS_2.1-201ENST00000613208 137 ntBASIC16.98■□□□□ 0.31
MMP2P08253 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
MMP2P08253 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC16.98■□□□□ 0.31
MMP2P08253 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
MMP2P08253 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC16.98■□□□□ 0.31
MMP2P08253 AL512652.2-201ENST00000625156 1716 ntBASIC16.98■□□□□ 0.31
MMP2P08253 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
MMP2P08253 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
MMP2P08253 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC16.98■□□□□ 0.31
MMP2P08253 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
MMP2P08253 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
MMP2P08253 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC16.97■□□□□ 0.31
MMP2P08253 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
MMP2P08253 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
MMP2P08253 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC16.97■□□□□ 0.31
MMP2P08253 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
MMP2P08253 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
MMP2P08253 AC012569.1-201ENST00000591191 1524 ntBASIC16.97■□□□□ 0.31
MMP2P08253 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC16.97■□□□□ 0.31
MMP2P08253 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
MMP2P08253 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC16.97■□□□□ 0.31
MMP2P08253 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
MMP2P08253 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
MMP2P08253 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
MMP2P08253 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
MMP2P08253 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
MMP2P08253 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
MMP2P08253 HMGA1P7-201ENST00000406908 502 ntBASIC16.97■□□□□ 0.31
MMP2P08253 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
MMP2P08253 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC16.97■□□□□ 0.31
MMP2P08253 AP000347.1-202ENST00000435868 847 ntBASIC16.97■□□□□ 0.31
MMP2P08253 AL513480.1-201ENST00000451731 511 ntBASIC16.97■□□□□ 0.31
MMP2P08253 HLA-J-202ENST00000469281 1241 ntBASIC16.97■□□□□ 0.31
MMP2P08253 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
MMP2P08253 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC16.97■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms