Protein–RNA interactions for Protein: P03979

TRGV3, T cell receptor gamma variable 3 (Fragment), humanhuman

Predictions only

Length 118 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV3P03979 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRGV3P03979 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRGV3P03979 AC073621.1-201ENST00000392730 636 ntBASIC13.35□□□□□ -0.27
TRGV3P03979 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
TRGV3P03979 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
TRGV3P03979 SLC4A1APP2-201ENST00000424054 1259 ntBASIC13.35□□□□□ -0.27
TRGV3P03979 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
TRGV3P03979 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC13.35□□□□□ -0.27
TRGV3P03979 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
TRGV3P03979 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC13.35□□□□□ -0.27
TRGV3P03979 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC13.35□□□□□ -0.27
TRGV3P03979 GGTLC5P-201ENST00000617623 998 ntBASIC13.35□□□□□ -0.27
TRGV3P03979 AC116407.3-201ENST00000623905 1129 ntBASIC13.35□□□□□ -0.27
TRGV3P03979 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRGV3P03979 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRGV3P03979 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
TRGV3P03979 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC13.35□□□□□ -0.27
TRGV3P03979 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC13.35□□□□□ -0.27
TRGV3P03979 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRGV3P03979 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRGV3P03979 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
TRGV3P03979 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
TRGV3P03979 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRGV3P03979 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
TRGV3P03979 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRGV3P03979 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRGV3P03979 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
TRGV3P03979 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC13.35□□□□□ -0.27
TRGV3P03979 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC13.35□□□□□ -0.27
TRGV3P03979 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRGV3P03979 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
TRGV3P03979 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRGV3P03979 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC13.35□□□□□ -0.27
TRGV3P03979 AC124067.4-201ENST00000519691 2379 ntBASIC13.35□□□□□ -0.27
TRGV3P03979 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
TRGV3P03979 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRGV3P03979 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC13.35□□□□□ -0.27
TRGV3P03979 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRGV3P03979 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRGV3P03979 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
TRGV3P03979 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
TRGV3P03979 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRGV3P03979 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
TRGV3P03979 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRGV3P03979 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
TRGV3P03979 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC13.34□□□□□ -0.27
TRGV3P03979 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC13.34□□□□□ -0.27
TRGV3P03979 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC13.34□□□□□ -0.27
TRGV3P03979 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
TRGV3P03979 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRGV3P03979 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC13.34□□□□□ -0.27
TRGV3P03979 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC13.34□□□□□ -0.27
TRGV3P03979 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRGV3P03979 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC13.34□□□□□ -0.27
TRGV3P03979 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC13.34□□□□□ -0.27
TRGV3P03979 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRGV3P03979 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRGV3P03979 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC13.34□□□□□ -0.27
TRGV3P03979 AC098831.1-202ENST00000438821 336 ntBASIC13.34□□□□□ -0.27
TRGV3P03979 FDX1P1-201ENST00000449115 551 ntBASIC13.34□□□□□ -0.27
TRGV3P03979 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC13.34□□□□□ -0.27
TRGV3P03979 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC13.34□□□□□ -0.27
TRGV3P03979 AC124947.2-201ENST00000547118 1133 ntBASIC13.34□□□□□ -0.27
TRGV3P03979 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC13.34□□□□□ -0.27
TRGV3P03979 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
TRGV3P03979 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC13.34□□□□□ -0.27
TRGV3P03979 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
TRGV3P03979 AC092053.1-201ENST00000605787 1936 ntBASIC13.34□□□□□ -0.27
TRGV3P03979 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRGV3P03979 AD000864.1-201ENST00000624076 2295 ntBASIC13.34□□□□□ -0.27
TRGV3P03979 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRGV3P03979 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRGV3P03979 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC13.34□□□□□ -0.27
TRGV3P03979 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
TRGV3P03979 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
TRGV3P03979 HNRNPRP1-201ENST00000453465 1695 ntBASIC13.34□□□□□ -0.27
TRGV3P03979 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
TRGV3P03979 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
TRGV3P03979 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC13.34□□□□□ -0.27
TRGV3P03979 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRGV3P03979 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRGV3P03979 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC13.33□□□□□ -0.27
TRGV3P03979 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
TRGV3P03979 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
TRGV3P03979 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC13.33□□□□□ -0.27
TRGV3P03979 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
TRGV3P03979 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC13.33□□□□□ -0.27
TRGV3P03979 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
TRGV3P03979 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.27
TRGV3P03979 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
TRGV3P03979 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
TRGV3P03979 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.27
TRGV3P03979 STX3-203ENST00000529177 1571 ntTSL 2 BASIC13.33□□□□□ -0.28
TRGV3P03979 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
TRGV3P03979 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC13.33□□□□□ -0.28
TRGV3P03979 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRGV3P03979 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRGV3P03979 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
TRGV3P03979 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRGV3P03979 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms