Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TNFP01375 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TNFP01375 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TNFP01375 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TNFP01375 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
TNFP01375 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC16.47■□□□□ 0.23
TNFP01375 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
TNFP01375 TSFM-210ENST00000550559 897 ntTSL 5 BASIC16.47■□□□□ 0.23
TNFP01375 LINC00896-202ENST00000609602 2128 ntBASIC16.47■□□□□ 0.23
TNFP01375 ORC5-208ENST00000626700 344 ntTSL 3 BASIC16.47■□□□□ 0.23
TNFP01375 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
TNFP01375 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TNFP01375 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TNFP01375 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TNFP01375 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC16.47■□□□□ 0.23
TNFP01375 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC16.47■□□□□ 0.23
TNFP01375 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TNFP01375 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TNFP01375 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
TNFP01375 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
TNFP01375 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
TNFP01375 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC16.47■□□□□ 0.23
TNFP01375 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TNFP01375 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
TNFP01375 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
TNFP01375 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC16.46■□□□□ 0.23
TNFP01375 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TNFP01375 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
TNFP01375 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
TNFP01375 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC16.46■□□□□ 0.23
TNFP01375 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TNFP01375 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TNFP01375 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC16.46■□□□□ 0.23
TNFP01375 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TNFP01375 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TNFP01375 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TNFP01375 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TNFP01375 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TNFP01375 HNRNPFP1-201ENST00000391730 1133 ntBASIC16.46■□□□□ 0.23
TNFP01375 KRT18P32-201ENST00000424695 1287 ntBASIC16.46■□□□□ 0.23
TNFP01375 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TNFP01375 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC16.46■□□□□ 0.23
TNFP01375 AC109322.1-201ENST00000524499 1264 ntBASIC16.46■□□□□ 0.23
TNFP01375 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC16.46■□□□□ 0.23
TNFP01375 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
TNFP01375 AC093520.2-201ENST00000561830 333 ntBASIC16.46■□□□□ 0.23
TNFP01375 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC16.46■□□□□ 0.23
TNFP01375 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC16.46■□□□□ 0.23
TNFP01375 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
TNFP01375 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC16.46■□□□□ 0.23
TNFP01375 MIR4492-201ENST00000581627 80 ntBASIC16.46■□□□□ 0.23
TNFP01375 LSM12-202ENST00000585388 942 ntTSL 3 BASIC16.46■□□□□ 0.23
TNFP01375 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC16.46■□□□□ 0.23
TNFP01375 AC009093.7-201ENST00000623853 1223 ntBASIC16.46■□□□□ 0.23
TNFP01375 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC16.46■□□□□ 0.23
TNFP01375 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TNFP01375 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TNFP01375 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
TNFP01375 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
TNFP01375 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC16.46■□□□□ 0.23
TNFP01375 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TNFP01375 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
TNFP01375 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
TNFP01375 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC16.45■□□□□ 0.22
TNFP01375 AC108860.2-201ENST00000562760 2183 ntBASIC16.45■□□□□ 0.22
TNFP01375 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TNFP01375 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
TNFP01375 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TNFP01375 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TNFP01375 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TNFP01375 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC16.45■□□□□ 0.22
TNFP01375 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
TNFP01375 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TNFP01375 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
TNFP01375 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC16.45■□□□□ 0.22
TNFP01375 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC16.45■□□□□ 0.22
TNFP01375 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TNFP01375 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
TNFP01375 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC16.45■□□□□ 0.22
TNFP01375 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC16.45■□□□□ 0.22
TNFP01375 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TNFP01375 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC16.45■□□□□ 0.22
TNFP01375 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC16.45■□□□□ 0.22
TNFP01375 SPCS2P4-201ENST00000436160 681 ntBASIC16.45■□□□□ 0.22
TNFP01375 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
TNFP01375 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC16.45■□□□□ 0.22
TNFP01375 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
TNFP01375 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TNFP01375 KRT8P23-201ENST00000560090 1207 ntBASIC16.45■□□□□ 0.22
TNFP01375 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC16.45■□□□□ 0.22
TNFP01375 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
TNFP01375 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC16.45■□□□□ 0.22
TNFP01375 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
TNFP01375 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
TNFP01375 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
TNFP01375 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
TNFP01375 SLC9A3P2-201ENST00000447821 2021 ntBASIC16.45■□□□□ 0.22
TNFP01375 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TNFP01375 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
TNFP01375 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms