Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC24.97■■□□□ 1.59
RAPGEF3O95398 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC24.97■■□□□ 1.59
RAPGEF3O95398 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC24.96■■□□□ 1.59
RAPGEF3O95398 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
RAPGEF3O95398 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
RAPGEF3O95398 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC24.96■■□□□ 1.59
RAPGEF3O95398 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
RAPGEF3O95398 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
RAPGEF3O95398 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC24.96■■□□□ 1.59
RAPGEF3O95398 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC24.96■■□□□ 1.59
RAPGEF3O95398 ELK2AP-201ENST00000392510 1007 ntBASIC24.96■■□□□ 1.59
RAPGEF3O95398 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
RAPGEF3O95398 SLC25A1P3-201ENST00000395415 828 ntBASIC24.96■■□□□ 1.59
RAPGEF3O95398 RAD18-204ENST00000418463 563 ntTSL 4 BASIC24.96■■□□□ 1.59
RAPGEF3O95398 RAD18-205ENST00000421052 582 ntTSL 3 BASIC24.96■■□□□ 1.59
RAPGEF3O95398 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC24.96■■□□□ 1.59
RAPGEF3O95398 ARL16-210ENST00000574938 751 ntTSL 2 BASIC24.96■■□□□ 1.59
RAPGEF3O95398 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC24.96■■□□□ 1.59
RAPGEF3O95398 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
RAPGEF3O95398 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC24.96■■□□□ 1.59
RAPGEF3O95398 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
RAPGEF3O95398 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC24.96■■□□□ 1.59
RAPGEF3O95398 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
RAPGEF3O95398 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC24.96■■□□□ 1.59
RAPGEF3O95398 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC24.96■■□□□ 1.59
RAPGEF3O95398 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC24.95■■□□□ 1.59
RAPGEF3O95398 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC24.95■■□□□ 1.59
RAPGEF3O95398 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC24.95■■□□□ 1.59
RAPGEF3O95398 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC24.95■■□□□ 1.59
RAPGEF3O95398 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.59
RAPGEF3O95398 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC24.95■■□□□ 1.58
RAPGEF3O95398 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
RAPGEF3O95398 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC24.95■■□□□ 1.58
RAPGEF3O95398 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
RAPGEF3O95398 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
RAPGEF3O95398 BRWD1P1-201ENST00000401091 371 ntBASIC24.95■■□□□ 1.58
RAPGEF3O95398 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC24.95■■□□□ 1.58
RAPGEF3O95398 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC24.95■■□□□ 1.58
RAPGEF3O95398 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC24.95■■□□□ 1.58
RAPGEF3O95398 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC24.95■■□□□ 1.58
RAPGEF3O95398 PAM16-204ENST00000571941 674 ntTSL 3 BASIC24.95■■□□□ 1.58
RAPGEF3O95398 NAA38-207ENST00000576861 556 ntTSL 3 BASIC24.95■■□□□ 1.58
RAPGEF3O95398 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC24.95■■□□□ 1.58
RAPGEF3O95398 FHL2-212ENST00000607522 759 ntTSL 2 BASIC24.95■■□□□ 1.58
RAPGEF3O95398 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC24.95■■□□□ 1.58
RAPGEF3O95398 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
RAPGEF3O95398 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC24.95■■□□□ 1.58
RAPGEF3O95398 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
RAPGEF3O95398 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC24.95■■□□□ 1.58
RAPGEF3O95398 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
RAPGEF3O95398 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
RAPGEF3O95398 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
RAPGEF3O95398 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC24.94■■□□□ 1.58
RAPGEF3O95398 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
RAPGEF3O95398 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
RAPGEF3O95398 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC24.94■■□□□ 1.58
RAPGEF3O95398 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC24.94■■□□□ 1.58
RAPGEF3O95398 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
RAPGEF3O95398 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC24.94■■□□□ 1.58
RAPGEF3O95398 AC092506.1-202ENST00000401022 528 ntBASIC24.94■■□□□ 1.58
RAPGEF3O95398 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC24.94■■□□□ 1.58
RAPGEF3O95398 SPDYE17-201ENST00000412399 783 ntBASIC24.94■■□□□ 1.58
RAPGEF3O95398 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC24.94■■□□□ 1.58
RAPGEF3O95398 KRT43P-201ENST00000434019 910 ntBASIC24.94■■□□□ 1.58
RAPGEF3O95398 ZNF767P-206ENST00000513792 565 ntBASIC24.94■■□□□ 1.58
RAPGEF3O95398 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC24.94■■□□□ 1.58
RAPGEF3O95398 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC24.94■■□□□ 1.58
RAPGEF3O95398 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC24.94■■□□□ 1.58
RAPGEF3O95398 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC24.94■■□□□ 1.58
RAPGEF3O95398 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
RAPGEF3O95398 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
RAPGEF3O95398 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC24.94■■□□□ 1.58
RAPGEF3O95398 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
RAPGEF3O95398 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
RAPGEF3O95398 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC24.93■■□□□ 1.58
RAPGEF3O95398 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC24.93■■□□□ 1.58
RAPGEF3O95398 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
RAPGEF3O95398 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC24.93■■□□□ 1.58
RAPGEF3O95398 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC24.93■■□□□ 1.58
RAPGEF3O95398 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC24.93■■□□□ 1.58
RAPGEF3O95398 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC24.93■■□□□ 1.58
RAPGEF3O95398 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
RAPGEF3O95398 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC24.93■■□□□ 1.58
RAPGEF3O95398 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
RAPGEF3O95398 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC24.93■■□□□ 1.58
RAPGEF3O95398 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
RAPGEF3O95398 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC24.93■■□□□ 1.58
RAPGEF3O95398 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
RAPGEF3O95398 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC24.93■■□□□ 1.58
RAPGEF3O95398 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
RAPGEF3O95398 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC24.93■■□□□ 1.58
RAPGEF3O95398 MIR3615-201ENST00000581999 87 ntBASIC24.93■■□□□ 1.58
RAPGEF3O95398 AC233724.13-201ENST00000598383 410 ntBASIC24.93■■□□□ 1.58
RAPGEF3O95398 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC24.93■■□□□ 1.58
RAPGEF3O95398 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC24.93■■□□□ 1.58
RAPGEF3O95398 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC24.93■■□□□ 1.58
RAPGEF3O95398 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
RAPGEF3O95398 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC24.93■■□□□ 1.58
RAPGEF3O95398 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC24.93■■□□□ 1.58
RAPGEF3O95398 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC24.93■■□□□ 1.58
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms