Protein–RNA interactions for Protein: O43900

PRICKLE3, Prickle planar cell polarity protein 3, humanhuman

Predicted RBP Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE3O43900 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PRICKLE3O43900 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC16.21■□□□□ 0.19
PRICKLE3O43900 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.19
PRICKLE3O43900 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PRICKLE3O43900 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC16.21■□□□□ 0.19
PRICKLE3O43900 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC16.21■□□□□ 0.19
PRICKLE3O43900 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC16.21■□□□□ 0.18
PRICKLE3O43900 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
PRICKLE3O43900 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
PRICKLE3O43900 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PRICKLE3O43900 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
PRICKLE3O43900 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
PRICKLE3O43900 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
PRICKLE3O43900 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PRICKLE3O43900 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
PRICKLE3O43900 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
PRICKLE3O43900 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PRICKLE3O43900 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC16.2■□□□□ 0.18
PRICKLE3O43900 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC16.2■□□□□ 0.18
PRICKLE3O43900 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PRICKLE3O43900 YBX2P1-201ENST00000394192 760 ntBASIC16.2■□□□□ 0.18
PRICKLE3O43900 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
PRICKLE3O43900 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC16.2■□□□□ 0.18
PRICKLE3O43900 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC16.2■□□□□ 0.18
PRICKLE3O43900 AC092183.1-201ENST00000469884 875 ntBASIC16.2■□□□□ 0.18
PRICKLE3O43900 SMN2-210ENST00000511812 867 ntTSL 2 BASIC16.2■□□□□ 0.18
PRICKLE3O43900 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC16.2■□□□□ 0.18
PRICKLE3O43900 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC16.2■□□□□ 0.18
PRICKLE3O43900 AP002490.2-201ENST00000524791 560 ntBASIC16.2■□□□□ 0.18
PRICKLE3O43900 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC16.2■□□□□ 0.18
PRICKLE3O43900 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
PRICKLE3O43900 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC16.2■□□□□ 0.18
PRICKLE3O43900 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PRICKLE3O43900 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC16.2■□□□□ 0.18
PRICKLE3O43900 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC16.2■□□□□ 0.18
PRICKLE3O43900 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC16.2■□□□□ 0.18
PRICKLE3O43900 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PRICKLE3O43900 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC16.2■□□□□ 0.18
PRICKLE3O43900 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC16.2■□□□□ 0.18
PRICKLE3O43900 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC16.2■□□□□ 0.18
PRICKLE3O43900 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
PRICKLE3O43900 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC16.2■□□□□ 0.18
PRICKLE3O43900 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC16.2■□□□□ 0.18
PRICKLE3O43900 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PRICKLE3O43900 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
PRICKLE3O43900 AL391256.1-201ENST00000443260 1855 ntBASIC16.2■□□□□ 0.18
PRICKLE3O43900 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PRICKLE3O43900 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PRICKLE3O43900 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PRICKLE3O43900 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PRICKLE3O43900 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PRICKLE3O43900 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PRICKLE3O43900 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
PRICKLE3O43900 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
PRICKLE3O43900 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
PRICKLE3O43900 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
PRICKLE3O43900 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC16.19■□□□□ 0.18
PRICKLE3O43900 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PRICKLE3O43900 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC16.19■□□□□ 0.18
PRICKLE3O43900 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
PRICKLE3O43900 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PRICKLE3O43900 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
PRICKLE3O43900 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PRICKLE3O43900 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
PRICKLE3O43900 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
PRICKLE3O43900 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PRICKLE3O43900 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PRICKLE3O43900 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PRICKLE3O43900 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PRICKLE3O43900 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PRICKLE3O43900 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
PRICKLE3O43900 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
PRICKLE3O43900 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PRICKLE3O43900 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
PRICKLE3O43900 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PRICKLE3O43900 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PRICKLE3O43900 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC16.19■□□□□ 0.18
PRICKLE3O43900 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC16.19■□□□□ 0.18
PRICKLE3O43900 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC16.19■□□□□ 0.18
PRICKLE3O43900 THTPA-204ENST00000554970 569 ntTSL 4 BASIC16.19■□□□□ 0.18
PRICKLE3O43900 THTPA-206ENST00000556015 535 ntTSL 3 BASIC16.19■□□□□ 0.18
PRICKLE3O43900 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC16.19■□□□□ 0.18
PRICKLE3O43900 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PRICKLE3O43900 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC16.19■□□□□ 0.18
PRICKLE3O43900 AL139011.1-202ENST00000642063 584 ntBASIC16.19■□□□□ 0.18
PRICKLE3O43900 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PRICKLE3O43900 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PRICKLE3O43900 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PRICKLE3O43900 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
PRICKLE3O43900 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
PRICKLE3O43900 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PRICKLE3O43900 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
PRICKLE3O43900 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PRICKLE3O43900 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
PRICKLE3O43900 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
PRICKLE3O43900 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
PRICKLE3O43900 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
PRICKLE3O43900 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PRICKLE3O43900 REM2-202ENST00000536884 1331 ntTSL 2 BASIC16.19■□□□□ 0.18
PRICKLE3O43900 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms