Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC28.47■■■□□ 2.15
CUX2O14529 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC28.47■■■□□ 2.15
CUX2O14529 NME4-207ENST00000450036 985 ntTSL 3 BASIC28.47■■■□□ 2.15
CUX2O14529 RHOA-206ENST00000454011 889 ntTSL 2 BASIC28.47■■■□□ 2.15
CUX2O14529 SERBP1P3-201ENST00000459980 809 ntBASIC28.47■■■□□ 2.15
CUX2O14529 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC28.47■■■□□ 2.15
CUX2O14529 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC28.47■■■□□ 2.15
CUX2O14529 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC28.47■■■□□ 2.15
CUX2O14529 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC28.47■■■□□ 2.15
CUX2O14529 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC28.47■■■□□ 2.15
CUX2O14529 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC28.47■■■□□ 2.15
CUX2O14529 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
CUX2O14529 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC28.47■■■□□ 2.15
CUX2O14529 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC28.47■■■□□ 2.15
CUX2O14529 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC28.47■■■□□ 2.15
CUX2O14529 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC28.47■■■□□ 2.15
CUX2O14529 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
CUX2O14529 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC28.47■■■□□ 2.15
CUX2O14529 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC28.47■■■□□ 2.15
CUX2O14529 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
CUX2O14529 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC28.46■■■□□ 2.15
CUX2O14529 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC28.46■■■□□ 2.15
CUX2O14529 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC28.46■■■□□ 2.15
CUX2O14529 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC28.46■■■□□ 2.15
CUX2O14529 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
CUX2O14529 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC28.46■■■□□ 2.15
CUX2O14529 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC28.46■■■□□ 2.15
CUX2O14529 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
CUX2O14529 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC28.46■■■□□ 2.15
CUX2O14529 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC28.46■■■□□ 2.15
CUX2O14529 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC28.46■■■□□ 2.15
CUX2O14529 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC28.46■■■□□ 2.15
CUX2O14529 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC28.46■■■□□ 2.15
CUX2O14529 EIF4HP1-201ENST00000453115 687 ntBASIC28.46■■■□□ 2.15
CUX2O14529 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC28.46■■■□□ 2.15
CUX2O14529 MCPH1-AS1-203ENST00000525186 869 ntTSL 3 BASIC28.46■■■□□ 2.15
CUX2O14529 AP001258.2-201ENST00000529891 490 ntBASIC28.46■■■□□ 2.15
CUX2O14529 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC28.46■■■□□ 2.15
CUX2O14529 DUX4L45-201ENST00000566406 1057 ntBASIC28.46■■■□□ 2.15
CUX2O14529 RN7SL560P-201ENST00000577943 264 ntBASIC28.46■■■□□ 2.15
CUX2O14529 ABBA01031663.1-201ENST00000635630 790 ntBASIC28.46■■■□□ 2.15
CUX2O14529 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
CUX2O14529 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC28.46■■■□□ 2.15
CUX2O14529 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC28.46■■■□□ 2.15
CUX2O14529 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC28.46■■■□□ 2.15
CUX2O14529 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC28.45■■■□□ 2.15
CUX2O14529 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC28.45■■■□□ 2.15
CUX2O14529 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC28.45■■■□□ 2.15
CUX2O14529 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC28.45■■■□□ 2.15
CUX2O14529 HLA-DQB1-201ENST00000374943 1656 ntBASIC28.45■■■□□ 2.15
CUX2O14529 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC28.45■■■□□ 2.15
CUX2O14529 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC28.45■■■□□ 2.14
CUX2O14529 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
CUX2O14529 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC28.45■■■□□ 2.14
CUX2O14529 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC28.45■■■□□ 2.14
CUX2O14529 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC28.45■■■□□ 2.14
CUX2O14529 AC092337.1-201ENST00000568699 1129 ntBASIC28.45■■■□□ 2.14
CUX2O14529 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC28.45■■■□□ 2.14
CUX2O14529 MNT-208ENST00000575394 606 ntTSL 4 BASIC28.45■■■□□ 2.14
CUX2O14529 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC28.45■■■□□ 2.14
CUX2O14529 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC28.45■■■□□ 2.14
CUX2O14529 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
CUX2O14529 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC28.44■■■□□ 2.14
CUX2O14529 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC28.44■■■□□ 2.14
CUX2O14529 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC28.44■■■□□ 2.14
CUX2O14529 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
CUX2O14529 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC28.44■■■□□ 2.14
CUX2O14529 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC28.44■■■□□ 2.14
CUX2O14529 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC28.44■■■□□ 2.14
CUX2O14529 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC28.44■■■□□ 2.14
CUX2O14529 TMEM205-216ENST00000593256 792 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
CUX2O14529 MIR7845-201ENST00000618396 99 ntBASIC28.44■■■□□ 2.14
CUX2O14529 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC28.44■■■□□ 2.14
CUX2O14529 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
CUX2O14529 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC28.44■■■□□ 2.14
CUX2O14529 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
CUX2O14529 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
CUX2O14529 NOC2LP1-202ENST00000452600 2235 ntBASIC28.44■■■□□ 2.14
CUX2O14529 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC28.44■■■□□ 2.14
CUX2O14529 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC28.44■■■□□ 2.14
CUX2O14529 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
CUX2O14529 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC28.43■■■□□ 2.14
CUX2O14529 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC28.43■■■□□ 2.14
CUX2O14529 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
CUX2O14529 AL662890.1-201ENST00000396818 632 ntBASIC28.43■■■□□ 2.14
CUX2O14529 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC28.43■■■□□ 2.14
CUX2O14529 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC28.43■■■□□ 2.14
CUX2O14529 OARD1-212ENST00000482515 832 ntTSL 2 BASIC28.43■■■□□ 2.14
CUX2O14529 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC28.43■■■□□ 2.14
CUX2O14529 DNAJC17-212ENST00000627802 428 ntTSL 4 BASIC28.43■■■□□ 2.14
CUX2O14529 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC28.43■■■□□ 2.14
CUX2O14529 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
CUX2O14529 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
CUX2O14529 CDC14C-201ENST00000428251 1719 ntBASIC28.43■■■□□ 2.14
CUX2O14529 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
CUX2O14529 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC28.42■■■□□ 2.14
CUX2O14529 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
CUX2O14529 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC28.42■■■□□ 2.14
CUX2O14529 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
CUX2O14529 AC234644.1-201ENST00000406065 370 ntBASIC28.42■■■□□ 2.14
Retrieved 100 of 98,524 protein–RNA pairs in 59.3 ms