Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRIM38O00635 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRIM38O00635 AC003669.1-201ENST00000334569 611 ntBASIC17.07■□□□□ 0.32
TRIM38O00635 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRIM38O00635 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC17.07■□□□□ 0.32
TRIM38O00635 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
TRIM38O00635 LBH-203ENST00000404397 543 ntTSL 4 BASIC17.07■□□□□ 0.32
TRIM38O00635 ALG1L5P-201ENST00000482043 771 ntBASIC17.07■□□□□ 0.32
TRIM38O00635 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC17.07■□□□□ 0.32
TRIM38O00635 IGHV3-65-201ENST00000523210 341 ntBASIC17.07■□□□□ 0.32
TRIM38O00635 AC008667.4-201ENST00000607370 168 ntBASIC17.07■□□□□ 0.32
TRIM38O00635 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TRIM38O00635 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRIM38O00635 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
TRIM38O00635 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC17.07■□□□□ 0.32
TRIM38O00635 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRIM38O00635 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TRIM38O00635 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRIM38O00635 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRIM38O00635 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC17.07■□□□□ 0.32
TRIM38O00635 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRIM38O00635 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TRIM38O00635 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRIM38O00635 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRIM38O00635 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRIM38O00635 TPR-209ENST00000613151 2478 ntTSL 5 BASIC17.07■□□□□ 0.32
TRIM38O00635 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TRIM38O00635 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC17.07■□□□□ 0.32
TRIM38O00635 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC17.07■□□□□ 0.32
TRIM38O00635 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRIM38O00635 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRIM38O00635 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC17.07■□□□□ 0.32
TRIM38O00635 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
TRIM38O00635 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC17.06■□□□□ 0.32
TRIM38O00635 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC17.06■□□□□ 0.32
TRIM38O00635 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC17.06■□□□□ 0.32
TRIM38O00635 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TRIM38O00635 GID4-202ENST00000376345 1391 ntTSL 3 BASIC17.06■□□□□ 0.32
TRIM38O00635 AC002310.6-201ENST00000624451 1377 ntBASIC17.06■□□□□ 0.32
TRIM38O00635 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRIM38O00635 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRIM38O00635 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRIM38O00635 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TRIM38O00635 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRIM38O00635 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC17.06■□□□□ 0.32
TRIM38O00635 HCG4B-203ENST00000450128 991 ntBASIC17.06■□□□□ 0.32
TRIM38O00635 S100A2-206ENST00000497140 697 ntTSL 2 BASIC17.06■□□□□ 0.32
TRIM38O00635 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC17.06■□□□□ 0.32
TRIM38O00635 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC17.06■□□□□ 0.32
TRIM38O00635 AC109462.3-201ENST00000573934 613 ntBASIC17.06■□□□□ 0.32
TRIM38O00635 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC17.06■□□□□ 0.32
TRIM38O00635 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC17.06■□□□□ 0.32
TRIM38O00635 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC17.06■□□□□ 0.32
TRIM38O00635 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC17.06■□□□□ 0.32
TRIM38O00635 AL513190.1-201ENST00000621254 727 ntBASIC17.06■□□□□ 0.32
TRIM38O00635 AC004790.2-201ENST00000623588 572 ntBASIC17.06■□□□□ 0.32
TRIM38O00635 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC17.06■□□□□ 0.32
TRIM38O00635 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TRIM38O00635 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
TRIM38O00635 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRIM38O00635 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRIM38O00635 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRIM38O00635 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC17.06■□□□□ 0.32
TRIM38O00635 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
TRIM38O00635 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRIM38O00635 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC17.05■□□□□ 0.32
TRIM38O00635 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
TRIM38O00635 PCDHA14-201ENST00000506751 2298 ntBASIC17.05■□□□□ 0.32
TRIM38O00635 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRIM38O00635 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRIM38O00635 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRIM38O00635 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRIM38O00635 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TRIM38O00635 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRIM38O00635 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
TRIM38O00635 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TRIM38O00635 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
TRIM38O00635 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRIM38O00635 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRIM38O00635 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC17.05■□□□□ 0.32
TRIM38O00635 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRIM38O00635 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
TRIM38O00635 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TRIM38O00635 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TRIM38O00635 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
TRIM38O00635 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC17.05■□□□□ 0.32
TRIM38O00635 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TRIM38O00635 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC17.05■□□□□ 0.32
TRIM38O00635 YBX1P5-201ENST00000509441 847 ntBASIC17.05■□□□□ 0.32
TRIM38O00635 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TRIM38O00635 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC17.05■□□□□ 0.32
TRIM38O00635 MIR4469-201ENST00000583919 79 ntBASIC17.05■□□□□ 0.32
TRIM38O00635 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRIM38O00635 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC17.05■□□□□ 0.32
TRIM38O00635 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TRIM38O00635 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC17.05■□□□□ 0.32
TRIM38O00635 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TRIM38O00635 CROCCP1-201ENST00000426910 5675 ntBASIC17.05■□□□□ 0.32
TRIM38O00635 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRIM38O00635 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms