Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC18.11■□□□□ 0.49
FOXN3O00409 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC18.11■□□□□ 0.49
FOXN3O00409 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC18.11■□□□□ 0.49
FOXN3O00409 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC18.11■□□□□ 0.49
FOXN3O00409 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC18.11■□□□□ 0.49
FOXN3O00409 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC18.11■□□□□ 0.49
FOXN3O00409 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC18.11■□□□□ 0.49
FOXN3O00409 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
FOXN3O00409 AC008735.5-201ENST00000623544 497 ntBASIC18.11■□□□□ 0.49
FOXN3O00409 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC18.11■□□□□ 0.49
FOXN3O00409 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
FOXN3O00409 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC18.11■□□□□ 0.49
FOXN3O00409 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
FOXN3O00409 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
FOXN3O00409 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC18.11■□□□□ 0.49
FOXN3O00409 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
FOXN3O00409 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
FOXN3O00409 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
FOXN3O00409 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC18.11■□□□□ 0.49
FOXN3O00409 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
FOXN3O00409 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
FOXN3O00409 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC18.11■□□□□ 0.49
FOXN3O00409 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
FOXN3O00409 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
FOXN3O00409 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
FOXN3O00409 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
FOXN3O00409 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
FOXN3O00409 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
FOXN3O00409 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
FOXN3O00409 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
FOXN3O00409 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
FOXN3O00409 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
FOXN3O00409 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
FOXN3O00409 ALOX12P2-203ENST00000570921 1945 ntBASIC18.1■□□□□ 0.49
FOXN3O00409 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
FOXN3O00409 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC18.1■□□□□ 0.49
FOXN3O00409 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC18.1■□□□□ 0.49
FOXN3O00409 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC18.1■□□□□ 0.49
FOXN3O00409 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
FOXN3O00409 AC006538.1-201ENST00000567905 1585 ntBASIC18.1■□□□□ 0.49
FOXN3O00409 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
FOXN3O00409 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC18.1■□□□□ 0.49
FOXN3O00409 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC18.1■□□□□ 0.49
FOXN3O00409 AC136632.2-201ENST00000512891 861 ntBASIC18.1■□□□□ 0.49
FOXN3O00409 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC18.1■□□□□ 0.49
FOXN3O00409 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC18.1■□□□□ 0.49
FOXN3O00409 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC18.1■□□□□ 0.49
FOXN3O00409 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
FOXN3O00409 PCDH8P1-201ENST00000428983 2773 ntBASIC18.1■□□□□ 0.49
FOXN3O00409 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
FOXN3O00409 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
FOXN3O00409 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
FOXN3O00409 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
FOXN3O00409 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
FOXN3O00409 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
FOXN3O00409 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
FOXN3O00409 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
FOXN3O00409 HARS-204ENST00000438307 1789 ntTSL 2 BASIC18.09■□□□□ 0.49
FOXN3O00409 SNX33P1-201ENST00000592116 1762 ntBASIC18.09■□□□□ 0.49
FOXN3O00409 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
FOXN3O00409 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
FOXN3O00409 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC18.09■□□□□ 0.49
FOXN3O00409 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
FOXN3O00409 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
FOXN3O00409 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
FOXN3O00409 AP002414.3-201ENST00000589352 1468 ntBASIC18.09■□□□□ 0.49
FOXN3O00409 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
FOXN3O00409 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
FOXN3O00409 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC18.09■□□□□ 0.49
FOXN3O00409 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
FOXN3O00409 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
FOXN3O00409 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
FOXN3O00409 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC18.09■□□□□ 0.49
FOXN3O00409 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
FOXN3O00409 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC18.09■□□□□ 0.49
FOXN3O00409 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
FOXN3O00409 AL450487.1-201ENST00000426799 995 ntBASIC18.09■□□□□ 0.49
FOXN3O00409 KRT18P67-201ENST00000432816 1264 ntBASIC18.09■□□□□ 0.49
FOXN3O00409 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
FOXN3O00409 MOK-208ENST00000519058 917 ntTSL 2 BASIC18.09■□□□□ 0.49
FOXN3O00409 MIR4492-201ENST00000581627 80 ntBASIC18.09■□□□□ 0.49
FOXN3O00409 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC18.09■□□□□ 0.49
FOXN3O00409 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
FOXN3O00409 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC18.09■□□□□ 0.49
FOXN3O00409 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC18.09■□□□□ 0.49
FOXN3O00409 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
FOXN3O00409 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
FOXN3O00409 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
FOXN3O00409 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
FOXN3O00409 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
FOXN3O00409 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
FOXN3O00409 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
FOXN3O00409 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC18.08■□□□□ 0.49
FOXN3O00409 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC18.08■□□□□ 0.49
FOXN3O00409 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
FOXN3O00409 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
FOXN3O00409 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
FOXN3O00409 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
FOXN3O00409 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
FOXN3O00409 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms