Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
PDLIM1O00151 FAM86EP-206ENST00000510506 987 ntBASIC16.19■□□□□ 0.18
PDLIM1O00151 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC16.19■□□□□ 0.18
PDLIM1O00151 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
PDLIM1O00151 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC16.19■□□□□ 0.18
PDLIM1O00151 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PDLIM1O00151 ZNF444P1-201ENST00000559497 298 ntBASIC16.19■□□□□ 0.18
PDLIM1O00151 AL136038.4-201ENST00000603606 1261 ntBASIC16.19■□□□□ 0.18
PDLIM1O00151 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC16.19■□□□□ 0.18
PDLIM1O00151 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PDLIM1O00151 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
PDLIM1O00151 CICP14-201ENST00000629111 2732 ntBASIC16.19■□□□□ 0.18
PDLIM1O00151 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PDLIM1O00151 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC16.19■□□□□ 0.18
PDLIM1O00151 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PDLIM1O00151 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PDLIM1O00151 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC16.19■□□□□ 0.18
PDLIM1O00151 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
PDLIM1O00151 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC16.19■□□□□ 0.18
PDLIM1O00151 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PDLIM1O00151 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC16.19■□□□□ 0.18
PDLIM1O00151 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
PDLIM1O00151 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PDLIM1O00151 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC16.18■□□□□ 0.18
PDLIM1O00151 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PDLIM1O00151 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PDLIM1O00151 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PDLIM1O00151 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PDLIM1O00151 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
PDLIM1O00151 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PDLIM1O00151 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PDLIM1O00151 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PDLIM1O00151 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC16.18■□□□□ 0.18
PDLIM1O00151 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC16.18■□□□□ 0.18
PDLIM1O00151 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC16.18■□□□□ 0.18
PDLIM1O00151 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PDLIM1O00151 PBK-203ENST00000522944 1499 ntTSL 2 BASIC16.18■□□□□ 0.18
PDLIM1O00151 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PDLIM1O00151 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PDLIM1O00151 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC16.18■□□□□ 0.18
PDLIM1O00151 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PDLIM1O00151 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC16.18■□□□□ 0.18
PDLIM1O00151 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PDLIM1O00151 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC16.18■□□□□ 0.18
PDLIM1O00151 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC16.18■□□□□ 0.18
PDLIM1O00151 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PDLIM1O00151 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC16.18■□□□□ 0.18
PDLIM1O00151 TK1-204ENST00000590430 683 ntTSL 3 BASIC16.18■□□□□ 0.18
PDLIM1O00151 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC16.18■□□□□ 0.18
PDLIM1O00151 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
PDLIM1O00151 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PDLIM1O00151 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
PDLIM1O00151 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC16.18■□□□□ 0.18
PDLIM1O00151 AC138035.3-201ENST00000622706 2791 ntBASIC16.18■□□□□ 0.18
PDLIM1O00151 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
PDLIM1O00151 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PDLIM1O00151 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PDLIM1O00151 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC16.17■□□□□ 0.18
PDLIM1O00151 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
PDLIM1O00151 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC16.17■□□□□ 0.18
PDLIM1O00151 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PDLIM1O00151 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PDLIM1O00151 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC16.17■□□□□ 0.18
PDLIM1O00151 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC16.17■□□□□ 0.18
PDLIM1O00151 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PDLIM1O00151 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PDLIM1O00151 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PDLIM1O00151 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PDLIM1O00151 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PDLIM1O00151 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PDLIM1O00151 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PDLIM1O00151 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
PDLIM1O00151 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC16.17■□□□□ 0.18
PDLIM1O00151 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC16.17■□□□□ 0.18
PDLIM1O00151 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC16.17■□□□□ 0.18
PDLIM1O00151 USF2-205ENST00000594064 1179 ntTSL 2 BASIC16.17■□□□□ 0.18
PDLIM1O00151 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC16.17■□□□□ 0.18
PDLIM1O00151 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
PDLIM1O00151 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
PDLIM1O00151 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
PDLIM1O00151 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC16.17■□□□□ 0.18
PDLIM1O00151 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
PDLIM1O00151 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
PDLIM1O00151 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
PDLIM1O00151 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PDLIM1O00151 SLC9A7P1-201ENST00000554295 3311 ntBASIC16.17■□□□□ 0.18
PDLIM1O00151 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PDLIM1O00151 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC16.17■□□□□ 0.18
PDLIM1O00151 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
PDLIM1O00151 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC16.17■□□□□ 0.18
PDLIM1O00151 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PDLIM1O00151 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PDLIM1O00151 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PDLIM1O00151 VILL-207ENST00000465644 1857 ntTSL 5 BASIC16.16■□□□□ 0.18
PDLIM1O00151 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PDLIM1O00151 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
PDLIM1O00151 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC16.16■□□□□ 0.18
PDLIM1O00151 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
PDLIM1O00151 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC16.16■□□□□ 0.18
PDLIM1O00151 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms