Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC17.63■□□□□ 0.41
CCDC188H7C350 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC17.63■□□□□ 0.41
CCDC188H7C350 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC188H7C350 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC188H7C350 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC188H7C350 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC188H7C350 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC17.62■□□□□ 0.41
CCDC188H7C350 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC188H7C350 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC188H7C350 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC188H7C350 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC188H7C350 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC17.62■□□□□ 0.41
CCDC188H7C350 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC188H7C350 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC188H7C350 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC188H7C350 FER1L4-210ENST00000615531 5998 ntBASIC17.62■□□□□ 0.41
CCDC188H7C350 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC188H7C350 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC17.62■□□□□ 0.41
CCDC188H7C350 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC188H7C350 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
CCDC188H7C350 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC188H7C350 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
CCDC188H7C350 SIGLEC30P-201ENST00000455569 941 ntBASIC17.62■□□□□ 0.41
CCDC188H7C350 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC17.62■□□□□ 0.41
CCDC188H7C350 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC17.62■□□□□ 0.41
CCDC188H7C350 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC17.62■□□□□ 0.41
CCDC188H7C350 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC17.62■□□□□ 0.41
CCDC188H7C350 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC188H7C350 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC188H7C350 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC188H7C350 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC188H7C350 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC188H7C350 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC188H7C350 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC188H7C350 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
CCDC188H7C350 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC188H7C350 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
CCDC188H7C350 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC17.62■□□□□ 0.41
CCDC188H7C350 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC17.62■□□□□ 0.41
CCDC188H7C350 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
CCDC188H7C350 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC188H7C350 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC17.62■□□□□ 0.41
CCDC188H7C350 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC188H7C350 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC188H7C350 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC17.61■□□□□ 0.41
CCDC188H7C350 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC17.61■□□□□ 0.41
CCDC188H7C350 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC17.61■□□□□ 0.41
CCDC188H7C350 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC188H7C350 AC005052.1-201ENST00000625181 2492 ntBASIC17.61■□□□□ 0.41
CCDC188H7C350 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC17.61■□□□□ 0.41
CCDC188H7C350 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC188H7C350 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
CCDC188H7C350 AK4P3-201ENST00000418260 669 ntBASIC17.61■□□□□ 0.41
CCDC188H7C350 AL596275.1-201ENST00000423464 877 ntBASIC17.61■□□□□ 0.41
CCDC188H7C350 VENTXP7-201ENST00000475503 772 ntBASIC17.61■□□□□ 0.41
CCDC188H7C350 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC188H7C350 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC17.61■□□□□ 0.41
CCDC188H7C350 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC17.61■□□□□ 0.41
CCDC188H7C350 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC17.61■□□□□ 0.41
CCDC188H7C350 AC012306.2-201ENST00000609350 630 ntBASIC17.61■□□□□ 0.41
CCDC188H7C350 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC188H7C350 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC17.61■□□□□ 0.41
CCDC188H7C350 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC17.61■□□□□ 0.41
CCDC188H7C350 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC188H7C350 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC17.61■□□□□ 0.41
CCDC188H7C350 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
CCDC188H7C350 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
CCDC188H7C350 AC103702.1-201ENST00000548801 2630 ntBASIC17.61■□□□□ 0.41
CCDC188H7C350 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC188H7C350 AC006277.1-201ENST00000624348 1610 ntBASIC17.61■□□□□ 0.41
CCDC188H7C350 HNRNPRP1-201ENST00000453465 1695 ntBASIC17.61■□□□□ 0.41
CCDC188H7C350 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC188H7C350 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC188H7C350 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC188H7C350 AL596087.1-201ENST00000400979 1969 ntBASIC17.6■□□□□ 0.41
CCDC188H7C350 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC188H7C350 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC188H7C350 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC188H7C350 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC188H7C350 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC188H7C350 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC188H7C350 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC188H7C350 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC188H7C350 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC188H7C350 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
CCDC188H7C350 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC188H7C350 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC188H7C350 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC188H7C350 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC17.6■□□□□ 0.41
CCDC188H7C350 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC17.6■□□□□ 0.41
CCDC188H7C350 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC188H7C350 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC188H7C350 PMPCAP1-201ENST00000508114 1576 ntBASIC17.6■□□□□ 0.41
CCDC188H7C350 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC188H7C350 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC17.6■□□□□ 0.41
CCDC188H7C350 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC17.6■□□□□ 0.41
CCDC188H7C350 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC188H7C350 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC188H7C350 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC188H7C350 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms