Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRIM49D1C9J1S8 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRIM49D1C9J1S8 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
TRIM49D1C9J1S8 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRIM49D1C9J1S8 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
TRIM49D1C9J1S8 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
TRIM49D1C9J1S8 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRIM49D1C9J1S8 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC17■□□□□ 0.31
TRIM49D1C9J1S8 ACTG1P4-201ENST00000425123 1122 ntBASIC17■□□□□ 0.31
TRIM49D1C9J1S8 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC17■□□□□ 0.31
TRIM49D1C9J1S8 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
TRIM49D1C9J1S8 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC17■□□□□ 0.31
TRIM49D1C9J1S8 PMPCAP1-201ENST00000508114 1576 ntBASIC17■□□□□ 0.31
TRIM49D1C9J1S8 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC17■□□□□ 0.31
TRIM49D1C9J1S8 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRIM49D1C9J1S8 NTF6B-201ENST00000591913 560 ntBASIC17■□□□□ 0.31
TRIM49D1C9J1S8 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
TRIM49D1C9J1S8 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
TRIM49D1C9J1S8 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRIM49D1C9J1S8 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC17■□□□□ 0.31
TRIM49D1C9J1S8 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRIM49D1C9J1S8 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
TRIM49D1C9J1S8 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
TRIM49D1C9J1S8 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
TRIM49D1C9J1S8 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC17■□□□□ 0.31
TRIM49D1C9J1S8 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC17■□□□□ 0.31
TRIM49D1C9J1S8 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRIM49D1C9J1S8 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
TRIM49D1C9J1S8 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRIM49D1C9J1S8 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC17■□□□□ 0.31
TRIM49D1C9J1S8 AC005052.1-201ENST00000625181 2492 ntBASIC16.99■□□□□ 0.31
TRIM49D1C9J1S8 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC16.99■□□□□ 0.31
TRIM49D1C9J1S8 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC16.99■□□□□ 0.31
TRIM49D1C9J1S8 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRIM49D1C9J1S8 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC16.99■□□□□ 0.31
TRIM49D1C9J1S8 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRIM49D1C9J1S8 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
TRIM49D1C9J1S8 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRIM49D1C9J1S8 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRIM49D1C9J1S8 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRIM49D1C9J1S8 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRIM49D1C9J1S8 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC16.99■□□□□ 0.31
TRIM49D1C9J1S8 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRIM49D1C9J1S8 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRIM49D1C9J1S8 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC16.99■□□□□ 0.31
TRIM49D1C9J1S8 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRIM49D1C9J1S8 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
TRIM49D1C9J1S8 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
TRIM49D1C9J1S8 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC16.99■□□□□ 0.31
TRIM49D1C9J1S8 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC16.99■□□□□ 0.31
TRIM49D1C9J1S8 CHCHD2P8-201ENST00000429873 447 ntBASIC16.99■□□□□ 0.31
TRIM49D1C9J1S8 SIGLEC30P-201ENST00000455569 941 ntBASIC16.99■□□□□ 0.31
TRIM49D1C9J1S8 DUX4L26-201ENST00000489078 1255 ntBASIC16.99■□□□□ 0.31
TRIM49D1C9J1S8 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRIM49D1C9J1S8 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
TRIM49D1C9J1S8 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC16.99■□□□□ 0.31
TRIM49D1C9J1S8 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
TRIM49D1C9J1S8 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
TRIM49D1C9J1S8 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC16.99■□□□□ 0.31
TRIM49D1C9J1S8 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TRIM49D1C9J1S8 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC16.99■□□□□ 0.31
TRIM49D1C9J1S8 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC16.99■□□□□ 0.31
TRIM49D1C9J1S8 PAUPAR-201ENST00000630360 2965 ntBASIC16.99■□□□□ 0.31
TRIM49D1C9J1S8 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC16.99■□□□□ 0.31
TRIM49D1C9J1S8 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRIM49D1C9J1S8 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TRIM49D1C9J1S8 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
TRIM49D1C9J1S8 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRIM49D1C9J1S8 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC16.99■□□□□ 0.31
TRIM49D1C9J1S8 LINC00895-201ENST00000629028 1637 ntBASIC16.99■□□□□ 0.31
TRIM49D1C9J1S8 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRIM49D1C9J1S8 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRIM49D1C9J1S8 PC-204ENST00000524491 1714 ntTSL 2 BASIC16.99■□□□□ 0.31
TRIM49D1C9J1S8 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRIM49D1C9J1S8 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TRIM49D1C9J1S8 ME2P1-201ENST00000426028 1970 ntBASIC16.98■□□□□ 0.31
TRIM49D1C9J1S8 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TRIM49D1C9J1S8 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRIM49D1C9J1S8 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC16.98■□□□□ 0.31
TRIM49D1C9J1S8 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRIM49D1C9J1S8 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TRIM49D1C9J1S8 INTS4P1-201ENST00000438455 1935 ntBASIC16.98■□□□□ 0.31
TRIM49D1C9J1S8 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC16.98■□□□□ 0.31
TRIM49D1C9J1S8 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC16.98■□□□□ 0.31
TRIM49D1C9J1S8 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
TRIM49D1C9J1S8 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC16.98■□□□□ 0.31
TRIM49D1C9J1S8 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TRIM49D1C9J1S8 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC16.98■□□□□ 0.31
TRIM49D1C9J1S8 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRIM49D1C9J1S8 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRIM49D1C9J1S8 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRIM49D1C9J1S8 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRIM49D1C9J1S8 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC16.98■□□□□ 0.31
TRIM49D1C9J1S8 BX276092.5-203ENST00000456199 560 ntBASIC16.98■□□□□ 0.31
TRIM49D1C9J1S8 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC16.98■□□□□ 0.31
TRIM49D1C9J1S8 LTBR-211ENST00000543190 785 ntTSL 3 BASIC16.98■□□□□ 0.31
TRIM49D1C9J1S8 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC16.98■□□□□ 0.31
TRIM49D1C9J1S8 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC16.98■□□□□ 0.31
TRIM49D1C9J1S8 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TRIM49D1C9J1S8 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC16.98■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 56.5 ms