Protein–RNA interactions for Protein: A6XGL0

YJEFN3, YjeF N-terminal domain-containing protein 3, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YJEFN3A6XGL0 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC17.6■□□□□ 0.41
YJEFN3A6XGL0 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC17.6■□□□□ 0.41
YJEFN3A6XGL0 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
YJEFN3A6XGL0 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
YJEFN3A6XGL0 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
YJEFN3A6XGL0 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
YJEFN3A6XGL0 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
YJEFN3A6XGL0 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
YJEFN3A6XGL0 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
YJEFN3A6XGL0 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
YJEFN3A6XGL0 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
YJEFN3A6XGL0 AL671710.1-201ENST00000610245 2349 ntBASIC17.6■□□□□ 0.41
YJEFN3A6XGL0 AC106886.4-201ENST00000623557 2502 ntBASIC17.6■□□□□ 0.41
YJEFN3A6XGL0 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC17.6■□□□□ 0.41
YJEFN3A6XGL0 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
YJEFN3A6XGL0 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
YJEFN3A6XGL0 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
YJEFN3A6XGL0 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
YJEFN3A6XGL0 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
YJEFN3A6XGL0 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
YJEFN3A6XGL0 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
YJEFN3A6XGL0 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC17.59■□□□□ 0.41
YJEFN3A6XGL0 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
YJEFN3A6XGL0 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
YJEFN3A6XGL0 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
YJEFN3A6XGL0 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
YJEFN3A6XGL0 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
YJEFN3A6XGL0 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
YJEFN3A6XGL0 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
YJEFN3A6XGL0 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
YJEFN3A6XGL0 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC17.59■□□□□ 0.41
YJEFN3A6XGL0 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC17.59■□□□□ 0.41
YJEFN3A6XGL0 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
YJEFN3A6XGL0 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC17.59■□□□□ 0.41
YJEFN3A6XGL0 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
YJEFN3A6XGL0 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
YJEFN3A6XGL0 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
YJEFN3A6XGL0 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
YJEFN3A6XGL0 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
YJEFN3A6XGL0 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
YJEFN3A6XGL0 NMU-203ENST00000507338 658 ntTSL 3 BASIC17.59■□□□□ 0.41
YJEFN3A6XGL0 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC17.59■□□□□ 0.41
YJEFN3A6XGL0 AP002472.1-201ENST00000577490 586 ntBASIC17.59■□□□□ 0.41
YJEFN3A6XGL0 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC17.59■□□□□ 0.41
YJEFN3A6XGL0 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC17.59■□□□□ 0.41
YJEFN3A6XGL0 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
YJEFN3A6XGL0 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
YJEFN3A6XGL0 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
YJEFN3A6XGL0 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
YJEFN3A6XGL0 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
YJEFN3A6XGL0 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
YJEFN3A6XGL0 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC17.59■□□□□ 0.41
YJEFN3A6XGL0 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
YJEFN3A6XGL0 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
YJEFN3A6XGL0 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC17.59■□□□□ 0.41
YJEFN3A6XGL0 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
YJEFN3A6XGL0 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
YJEFN3A6XGL0 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC17.59■□□□□ 0.41
YJEFN3A6XGL0 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
YJEFN3A6XGL0 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC17.59■□□□□ 0.41
YJEFN3A6XGL0 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
YJEFN3A6XGL0 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
YJEFN3A6XGL0 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
YJEFN3A6XGL0 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC17.58■□□□□ 0.41
YJEFN3A6XGL0 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
YJEFN3A6XGL0 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
YJEFN3A6XGL0 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC17.58■□□□□ 0.41
YJEFN3A6XGL0 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
YJEFN3A6XGL0 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.41
YJEFN3A6XGL0 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
YJEFN3A6XGL0 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
YJEFN3A6XGL0 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
YJEFN3A6XGL0 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC17.58■□□□□ 0.4
YJEFN3A6XGL0 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
YJEFN3A6XGL0 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
YJEFN3A6XGL0 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
YJEFN3A6XGL0 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC17.58■□□□□ 0.4
YJEFN3A6XGL0 KRT18P13-201ENST00000400056 1290 ntBASIC17.58■□□□□ 0.4
YJEFN3A6XGL0 RPSAP43-201ENST00000402237 625 ntBASIC17.58■□□□□ 0.4
YJEFN3A6XGL0 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC17.58■□□□□ 0.4
YJEFN3A6XGL0 GPX1P2-201ENST00000429271 606 ntBASIC17.58■□□□□ 0.4
YJEFN3A6XGL0 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
YJEFN3A6XGL0 ALG1L5P-201ENST00000482043 771 ntBASIC17.58■□□□□ 0.4
YJEFN3A6XGL0 AC112482.1-201ENST00000492080 688 ntBASIC17.58■□□□□ 0.4
YJEFN3A6XGL0 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC17.58■□□□□ 0.4
YJEFN3A6XGL0 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC17.58■□□□□ 0.4
YJEFN3A6XGL0 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC17.58■□□□□ 0.4
YJEFN3A6XGL0 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC17.58■□□□□ 0.4
YJEFN3A6XGL0 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
YJEFN3A6XGL0 AL078644.1-201ENST00000609881 752 ntBASIC17.58■□□□□ 0.4
YJEFN3A6XGL0 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC17.58■□□□□ 0.4
YJEFN3A6XGL0 AP001350.2-201ENST00000625104 1094 ntBASIC17.58■□□□□ 0.4
YJEFN3A6XGL0 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
YJEFN3A6XGL0 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
YJEFN3A6XGL0 AC078925.2-201ENST00000624013 1973 ntBASIC17.58■□□□□ 0.4
YJEFN3A6XGL0 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
YJEFN3A6XGL0 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
YJEFN3A6XGL0 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
YJEFN3A6XGL0 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
YJEFN3A6XGL0 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC17.58■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms