Protein–RNA interactions for Protein: A6NKT7

RGPD3, RanBP2-like and GRIP domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 1,758 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3A6NKT7 HNRNPA1P48-201ENST00000562726 1377 ntBASIC21.01■□□□□ 0.95
RGPD3A6NKT7 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC21.01■□□□□ 0.95
RGPD3A6NKT7 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC21.01■□□□□ 0.95
RGPD3A6NKT7 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RGPD3A6NKT7 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RGPD3A6NKT7 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RGPD3A6NKT7 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RGPD3A6NKT7 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RGPD3A6NKT7 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC21.01■□□□□ 0.95
RGPD3A6NKT7 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
RGPD3A6NKT7 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC21.01■□□□□ 0.95
RGPD3A6NKT7 BRI3BPP1-201ENST00000594224 787 ntBASIC21.01■□□□□ 0.95
RGPD3A6NKT7 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC21.01■□□□□ 0.95
RGPD3A6NKT7 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RGPD3A6NKT7 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
RGPD3A6NKT7 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
RGPD3A6NKT7 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RGPD3A6NKT7 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
RGPD3A6NKT7 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
RGPD3A6NKT7 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
RGPD3A6NKT7 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
RGPD3A6NKT7 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC21■□□□□ 0.95
RGPD3A6NKT7 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC21■□□□□ 0.95
RGPD3A6NKT7 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
RGPD3A6NKT7 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC21■□□□□ 0.95
RGPD3A6NKT7 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
RGPD3A6NKT7 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
RGPD3A6NKT7 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC21■□□□□ 0.95
RGPD3A6NKT7 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC21■□□□□ 0.95
RGPD3A6NKT7 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC21■□□□□ 0.95
RGPD3A6NKT7 FAM86HP-204ENST00000513466 959 ntBASIC21■□□□□ 0.95
RGPD3A6NKT7 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC21■□□□□ 0.95
RGPD3A6NKT7 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC21■□□□□ 0.95
RGPD3A6NKT7 AC036164.1-201ENST00000570544 333 ntBASIC21■□□□□ 0.95
RGPD3A6NKT7 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RGPD3A6NKT7 FRMD8P1-201ENST00000440433 1524 ntBASIC21■□□□□ 0.95
RGPD3A6NKT7 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC21■□□□□ 0.95
RGPD3A6NKT7 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC21■□□□□ 0.95
RGPD3A6NKT7 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RGPD3A6NKT7 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RGPD3A6NKT7 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC21■□□□□ 0.95
RGPD3A6NKT7 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC21■□□□□ 0.95
RGPD3A6NKT7 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RGPD3A6NKT7 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC21■□□□□ 0.95
RGPD3A6NKT7 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC21■□□□□ 0.95
RGPD3A6NKT7 GNRHR2-203ENST00000581100 1187 ntBASIC21■□□□□ 0.95
RGPD3A6NKT7 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC21■□□□□ 0.95
RGPD3A6NKT7 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
RGPD3A6NKT7 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RGPD3A6NKT7 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
RGPD3A6NKT7 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
RGPD3A6NKT7 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RGPD3A6NKT7 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
RGPD3A6NKT7 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
RGPD3A6NKT7 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RGPD3A6NKT7 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC20.99■□□□□ 0.95
RGPD3A6NKT7 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
RGPD3A6NKT7 DEK-201ENST00000244776 1441 ntTSL 2 BASIC20.99■□□□□ 0.95
RGPD3A6NKT7 WIZP1-201ENST00000531444 2299 ntBASIC20.99■□□□□ 0.95
RGPD3A6NKT7 AMT-232ENST00000636199 1546 ntTSL 5 BASIC20.99■□□□□ 0.95
RGPD3A6NKT7 NME4-207ENST00000450036 985 ntTSL 3 BASIC20.99■□□□□ 0.95
RGPD3A6NKT7 AC104596.2-201ENST00000512793 793 ntBASIC20.99■□□□□ 0.95
RGPD3A6NKT7 SLC25A47P1-201ENST00000531577 414 ntBASIC20.99■□□□□ 0.95
RGPD3A6NKT7 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC20.99■□□□□ 0.95
RGPD3A6NKT7 KRT90P-201ENST00000549264 1064 ntBASIC20.99■□□□□ 0.95
RGPD3A6NKT7 LOX-206ENST00000639739 1626 ntTSL 5 BASIC20.99■□□□□ 0.95
RGPD3A6NKT7 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RGPD3A6NKT7 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RGPD3A6NKT7 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RGPD3A6NKT7 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
RGPD3A6NKT7 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
RGPD3A6NKT7 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RGPD3A6NKT7 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RGPD3A6NKT7 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RGPD3A6NKT7 TP73-213ENST00000604479 1623 ntTSL 5 BASIC20.98■□□□□ 0.95
RGPD3A6NKT7 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC20.98■□□□□ 0.95
RGPD3A6NKT7 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
RGPD3A6NKT7 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
RGPD3A6NKT7 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC20.98■□□□□ 0.95
RGPD3A6NKT7 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC20.98■□□□□ 0.95
RGPD3A6NKT7 KRT8P13-201ENST00000463294 1010 ntBASIC20.98■□□□□ 0.95
RGPD3A6NKT7 FTH1P14-201ENST00000482930 551 ntBASIC20.98■□□□□ 0.95
RGPD3A6NKT7 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC20.98■□□□□ 0.95
RGPD3A6NKT7 AC124283.3-201ENST00000570869 594 ntBASIC20.98■□□□□ 0.95
RGPD3A6NKT7 RN7SL560P-201ENST00000577943 264 ntBASIC20.98■□□□□ 0.95
RGPD3A6NKT7 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC20.98■□□□□ 0.95
RGPD3A6NKT7 AL365330.1-201ENST00000607459 531 ntBASIC20.98■□□□□ 0.95
RGPD3A6NKT7 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC20.98■□□□□ 0.95
RGPD3A6NKT7 AC015967.2-201ENST00000624092 234 ntBASIC20.98■□□□□ 0.95
RGPD3A6NKT7 AC006435.4-201ENST00000625037 234 ntBASIC20.98■□□□□ 0.95
RGPD3A6NKT7 AL356737.1-201ENST00000634391 234 ntBASIC20.98■□□□□ 0.95
RGPD3A6NKT7 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
RGPD3A6NKT7 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
RGPD3A6NKT7 AC108860.2-201ENST00000562760 2183 ntBASIC20.98■□□□□ 0.95
RGPD3A6NKT7 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RGPD3A6NKT7 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC20.98■□□□□ 0.95
RGPD3A6NKT7 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC20.98■□□□□ 0.95
RGPD3A6NKT7 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RGPD3A6NKT7 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC20.98■□□□□ 0.95
RGPD3A6NKT7 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 56.6 ms