Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC18.01■□□□□ 0.47
RCCD1A6NED2 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC18.01■□□□□ 0.47
RCCD1A6NED2 AC243591.1-201ENST00000452967 1364 ntBASIC18.01■□□□□ 0.47
RCCD1A6NED2 AL021920.2-201ENST00000624828 1351 ntBASIC18.01■□□□□ 0.47
RCCD1A6NED2 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
RCCD1A6NED2 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RCCD1A6NED2 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RCCD1A6NED2 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
RCCD1A6NED2 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RCCD1A6NED2 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
RCCD1A6NED2 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC18.01■□□□□ 0.47
RCCD1A6NED2 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RCCD1A6NED2 AL590787.1-201ENST00000568856 1315 ntBASIC18■□□□□ 0.47
RCCD1A6NED2 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC18■□□□□ 0.47
RCCD1A6NED2 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RCCD1A6NED2 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC18■□□□□ 0.47
RCCD1A6NED2 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC18■□□□□ 0.47
RCCD1A6NED2 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC18■□□□□ 0.47
RCCD1A6NED2 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC18■□□□□ 0.47
RCCD1A6NED2 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RCCD1A6NED2 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RCCD1A6NED2 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
RCCD1A6NED2 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RCCD1A6NED2 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC18■□□□□ 0.47
RCCD1A6NED2 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC18■□□□□ 0.47
RCCD1A6NED2 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC18■□□□□ 0.47
RCCD1A6NED2 TSSC2-201ENST00000450217 709 ntBASIC18■□□□□ 0.47
RCCD1A6NED2 MINOS1P3-201ENST00000457048 203 ntBASIC18■□□□□ 0.47
RCCD1A6NED2 TOB2P1-201ENST00000469761 992 ntBASIC18■□□□□ 0.47
RCCD1A6NED2 BET1L-206ENST00000486280 665 ntTSL 3 BASIC18■□□□□ 0.47
RCCD1A6NED2 CIB2-208ENST00000560618 804 ntTSL 2 BASIC18■□□□□ 0.47
RCCD1A6NED2 LINC01238-205ENST00000567549 1107 ntBASIC18■□□□□ 0.47
RCCD1A6NED2 AC073592.4-201ENST00000623827 446 ntBASIC18■□□□□ 0.47
RCCD1A6NED2 AL121956.5-201ENST00000625261 221 ntBASIC18■□□□□ 0.47
RCCD1A6NED2 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC18■□□□□ 0.47
RCCD1A6NED2 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC18■□□□□ 0.47
RCCD1A6NED2 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RCCD1A6NED2 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RCCD1A6NED2 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
RCCD1A6NED2 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RCCD1A6NED2 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC18■□□□□ 0.47
RCCD1A6NED2 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
RCCD1A6NED2 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RCCD1A6NED2 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RCCD1A6NED2 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC18■□□□□ 0.47
RCCD1A6NED2 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RCCD1A6NED2 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC18■□□□□ 0.47
RCCD1A6NED2 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC18■□□□□ 0.47
RCCD1A6NED2 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
RCCD1A6NED2 AC103702.1-201ENST00000548801 2630 ntBASIC18■□□□□ 0.47
RCCD1A6NED2 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC18■□□□□ 0.47
RCCD1A6NED2 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC17.99■□□□□ 0.47
RCCD1A6NED2 GGT3P-204ENST00000453783 1664 ntBASIC17.99■□□□□ 0.47
RCCD1A6NED2 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
RCCD1A6NED2 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
RCCD1A6NED2 AL603832.2-201ENST00000566195 2125 ntBASIC17.99■□□□□ 0.47
RCCD1A6NED2 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
RCCD1A6NED2 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
RCCD1A6NED2 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
RCCD1A6NED2 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
RCCD1A6NED2 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RCCD1A6NED2 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RCCD1A6NED2 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC17.99■□□□□ 0.47
RCCD1A6NED2 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC17.99■□□□□ 0.47
RCCD1A6NED2 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
RCCD1A6NED2 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC17.99■□□□□ 0.47
RCCD1A6NED2 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC17.99■□□□□ 0.47
RCCD1A6NED2 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
RCCD1A6NED2 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
RCCD1A6NED2 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RCCD1A6NED2 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC17.99■□□□□ 0.47
RCCD1A6NED2 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC17.99■□□□□ 0.47
RCCD1A6NED2 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
RCCD1A6NED2 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC17.99■□□□□ 0.47
RCCD1A6NED2 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
RCCD1A6NED2 KRT18P21-201ENST00000515767 1272 ntBASIC17.99■□□□□ 0.47
RCCD1A6NED2 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RCCD1A6NED2 TERC-201ENST00000602385 541 ntBASIC17.99■□□□□ 0.47
RCCD1A6NED2 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RCCD1A6NED2 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC17.99■□□□□ 0.47
RCCD1A6NED2 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
RCCD1A6NED2 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RCCD1A6NED2 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RCCD1A6NED2 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC17.99■□□□□ 0.47
RCCD1A6NED2 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RCCD1A6NED2 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC17.99■□□□□ 0.47
RCCD1A6NED2 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RCCD1A6NED2 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
RCCD1A6NED2 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RCCD1A6NED2 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC17.99■□□□□ 0.47
RCCD1A6NED2 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
RCCD1A6NED2 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RCCD1A6NED2 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RCCD1A6NED2 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RCCD1A6NED2 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC17.98■□□□□ 0.47
RCCD1A6NED2 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RCCD1A6NED2 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC17.98■□□□□ 0.47
RCCD1A6NED2 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC17.98■□□□□ 0.47
RCCD1A6NED2 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RCCD1A6NED2 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC17.98■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms