Protein–RNA interactions for Protein: A0A0C4DH59

TRBV5-4, T-cell receptor beta variable 5-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-4A0A0C4DH59 MED15P5-201ENST00000423150 992 ntBASIC16.6■□□□□ 0.25
TRBV5-4A0A0C4DH59 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC16.6■□□□□ 0.25
TRBV5-4A0A0C4DH59 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC16.6■□□□□ 0.25
TRBV5-4A0A0C4DH59 AC018845.2-201ENST00000568326 409 ntBASIC16.6■□□□□ 0.25
TRBV5-4A0A0C4DH59 MIR3909-201ENST00000579518 119 ntBASIC16.6■□□□□ 0.25
TRBV5-4A0A0C4DH59 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC16.6■□□□□ 0.25
TRBV5-4A0A0C4DH59 AC023141.13-201ENST00000604991 943 ntBASIC16.6■□□□□ 0.25
TRBV5-4A0A0C4DH59 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
TRBV5-4A0A0C4DH59 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TRBV5-4A0A0C4DH59 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC16.6■□□□□ 0.25
TRBV5-4A0A0C4DH59 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRBV5-4A0A0C4DH59 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRBV5-4A0A0C4DH59 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC16.6■□□□□ 0.25
TRBV5-4A0A0C4DH59 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TRBV5-4A0A0C4DH59 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
TRBV5-4A0A0C4DH59 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC16.6■□□□□ 0.25
TRBV5-4A0A0C4DH59 AC092171.3-201ENST00000610122 2651 ntBASIC16.6■□□□□ 0.25
TRBV5-4A0A0C4DH59 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRBV5-4A0A0C4DH59 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC16.6■□□□□ 0.25
TRBV5-4A0A0C4DH59 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC16.6■□□□□ 0.25
TRBV5-4A0A0C4DH59 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRBV5-4A0A0C4DH59 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRBV5-4A0A0C4DH59 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TRBV5-4A0A0C4DH59 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRBV5-4A0A0C4DH59 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRBV5-4A0A0C4DH59 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
TRBV5-4A0A0C4DH59 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRBV5-4A0A0C4DH59 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRBV5-4A0A0C4DH59 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
TRBV5-4A0A0C4DH59 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
TRBV5-4A0A0C4DH59 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRBV5-4A0A0C4DH59 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC16.59■□□□□ 0.25
TRBV5-4A0A0C4DH59 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRBV5-4A0A0C4DH59 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
TRBV5-4A0A0C4DH59 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRBV5-4A0A0C4DH59 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC16.59■□□□□ 0.25
TRBV5-4A0A0C4DH59 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRBV5-4A0A0C4DH59 RNU1-129P-201ENST00000384064 167 ntBASIC16.59■□□□□ 0.25
TRBV5-4A0A0C4DH59 FALEC-201ENST00000416894 566 ntTSL 3 BASIC16.59■□□□□ 0.25
TRBV5-4A0A0C4DH59 CDK2AP2P3-201ENST00000422476 372 ntBASIC16.59■□□□□ 0.25
TRBV5-4A0A0C4DH59 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC16.59■□□□□ 0.25
TRBV5-4A0A0C4DH59 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC16.59■□□□□ 0.25
TRBV5-4A0A0C4DH59 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
TRBV5-4A0A0C4DH59 KRT18P3-201ENST00000451602 1288 ntBASIC16.59■□□□□ 0.25
TRBV5-4A0A0C4DH59 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC16.59■□□□□ 0.25
TRBV5-4A0A0C4DH59 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC16.59■□□□□ 0.25
TRBV5-4A0A0C4DH59 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC16.59■□□□□ 0.25
TRBV5-4A0A0C4DH59 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC16.59■□□□□ 0.25
TRBV5-4A0A0C4DH59 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC16.59■□□□□ 0.25
TRBV5-4A0A0C4DH59 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC16.59■□□□□ 0.25
TRBV5-4A0A0C4DH59 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
TRBV5-4A0A0C4DH59 KRT19P2-202ENST00000557173 1012 ntBASIC16.59■□□□□ 0.25
TRBV5-4A0A0C4DH59 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
TRBV5-4A0A0C4DH59 U1.21-201ENST00000580816 167 ntBASIC16.59■□□□□ 0.25
TRBV5-4A0A0C4DH59 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC16.59■□□□□ 0.25
TRBV5-4A0A0C4DH59 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
TRBV5-4A0A0C4DH59 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRBV5-4A0A0C4DH59 AC004877.2-201ENST00000623941 599 ntBASIC16.59■□□□□ 0.25
TRBV5-4A0A0C4DH59 CAND2-206ENST00000626378 333 ntTSL 5 BASIC16.59■□□□□ 0.25
TRBV5-4A0A0C4DH59 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRBV5-4A0A0C4DH59 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TRBV5-4A0A0C4DH59 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRBV5-4A0A0C4DH59 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
TRBV5-4A0A0C4DH59 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRBV5-4A0A0C4DH59 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRBV5-4A0A0C4DH59 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRBV5-4A0A0C4DH59 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TRBV5-4A0A0C4DH59 CA12-203ENST00000422263 2556 ntTSL 2 BASIC16.59■□□□□ 0.25
TRBV5-4A0A0C4DH59 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC16.59■□□□□ 0.25
TRBV5-4A0A0C4DH59 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRBV5-4A0A0C4DH59 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRBV5-4A0A0C4DH59 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRBV5-4A0A0C4DH59 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TRBV5-4A0A0C4DH59 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
TRBV5-4A0A0C4DH59 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
TRBV5-4A0A0C4DH59 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TRBV5-4A0A0C4DH59 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TRBV5-4A0A0C4DH59 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TRBV5-4A0A0C4DH59 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRBV5-4A0A0C4DH59 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TRBV5-4A0A0C4DH59 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC16.58■□□□□ 0.24
TRBV5-4A0A0C4DH59 MIR574-201ENST00000385209 96 ntBASIC16.58■□□□□ 0.24
TRBV5-4A0A0C4DH59 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC16.58■□□□□ 0.24
TRBV5-4A0A0C4DH59 STARD13-205ENST00000439831 945 ntTSL 2 BASIC16.58■□□□□ 0.24
TRBV5-4A0A0C4DH59 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TRBV5-4A0A0C4DH59 RNA5SP416-201ENST00000516838 111 ntBASIC16.58■□□□□ 0.24
TRBV5-4A0A0C4DH59 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC16.58■□□□□ 0.24
TRBV5-4A0A0C4DH59 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC16.58■□□□□ 0.24
TRBV5-4A0A0C4DH59 MAL2-202ENST00000531508 892 ntTSL 3 BASIC16.58■□□□□ 0.24
TRBV5-4A0A0C4DH59 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC16.58■□□□□ 0.24
TRBV5-4A0A0C4DH59 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC16.58■□□□□ 0.24
TRBV5-4A0A0C4DH59 THTPA-204ENST00000554970 569 ntTSL 4 BASIC16.58■□□□□ 0.24
TRBV5-4A0A0C4DH59 THTPA-206ENST00000556015 535 ntTSL 3 BASIC16.58■□□□□ 0.24
TRBV5-4A0A0C4DH59 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC16.58■□□□□ 0.24
TRBV5-4A0A0C4DH59 AL671883.3-201ENST00000603274 991 ntBASIC16.58■□□□□ 0.24
TRBV5-4A0A0C4DH59 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRBV5-4A0A0C4DH59 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRBV5-4A0A0C4DH59 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
TRBV5-4A0A0C4DH59 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC16.58■□□□□ 0.24
TRBV5-4A0A0C4DH59 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms