Protein–RNA interactions for Protein: A0A0A0MS04

TRBV6-7, T-cell receptor beta variable 6-7 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-7A0A0A0MS04 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
TRBV6-7A0A0A0MS04 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
TRBV6-7A0A0A0MS04 AMT-233ENST00000636522 1620 ntTSL 2 BASIC14.2□□□□□ -0.14
TRBV6-7A0A0A0MS04 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRBV6-7A0A0A0MS04 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRBV6-7A0A0A0MS04 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRBV6-7A0A0A0MS04 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC14.2□□□□□ -0.14
TRBV6-7A0A0A0MS04 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRBV6-7A0A0A0MS04 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRBV6-7A0A0A0MS04 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRBV6-7A0A0A0MS04 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRBV6-7A0A0A0MS04 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRBV6-7A0A0A0MS04 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC14.2□□□□□ -0.14
TRBV6-7A0A0A0MS04 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC14.2□□□□□ -0.14
TRBV6-7A0A0A0MS04 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC14.2□□□□□ -0.14
TRBV6-7A0A0A0MS04 RN7SL850P-201ENST00000579959 291 ntBASIC14.2□□□□□ -0.14
TRBV6-7A0A0A0MS04 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRBV6-7A0A0A0MS04 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC14.2□□□□□ -0.14
TRBV6-7A0A0A0MS04 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRBV6-7A0A0A0MS04 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TRBV6-7A0A0A0MS04 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
TRBV6-7A0A0A0MS04 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRBV6-7A0A0A0MS04 AL136379.1-201ENST00000623471 2642 ntBASIC14.2□□□□□ -0.14
TRBV6-7A0A0A0MS04 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC14.2□□□□□ -0.14
TRBV6-7A0A0A0MS04 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRBV6-7A0A0A0MS04 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC14.2□□□□□ -0.14
TRBV6-7A0A0A0MS04 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
TRBV6-7A0A0A0MS04 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC14.2□□□□□ -0.14
TRBV6-7A0A0A0MS04 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRBV6-7A0A0A0MS04 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRBV6-7A0A0A0MS04 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRBV6-7A0A0A0MS04 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TRBV6-7A0A0A0MS04 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TRBV6-7A0A0A0MS04 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRBV6-7A0A0A0MS04 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRBV6-7A0A0A0MS04 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRBV6-7A0A0A0MS04 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRBV6-7A0A0A0MS04 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
TRBV6-7A0A0A0MS04 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRBV6-7A0A0A0MS04 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC14.19□□□□□ -0.14
TRBV6-7A0A0A0MS04 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC14.19□□□□□ -0.14
TRBV6-7A0A0A0MS04 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC14.19□□□□□ -0.14
TRBV6-7A0A0A0MS04 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TRBV6-7A0A0A0MS04 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC14.19□□□□□ -0.14
TRBV6-7A0A0A0MS04 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRBV6-7A0A0A0MS04 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRBV6-7A0A0A0MS04 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
TRBV6-7A0A0A0MS04 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC14.19□□□□□ -0.14
TRBV6-7A0A0A0MS04 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRBV6-7A0A0A0MS04 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRBV6-7A0A0A0MS04 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRBV6-7A0A0A0MS04 RCN1P1-201ENST00000400413 996 ntBASIC14.19□□□□□ -0.14
TRBV6-7A0A0A0MS04 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC14.19□□□□□ -0.14
TRBV6-7A0A0A0MS04 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
TRBV6-7A0A0A0MS04 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC14.19□□□□□ -0.14
TRBV6-7A0A0A0MS04 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
TRBV6-7A0A0A0MS04 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC14.19□□□□□ -0.14
TRBV6-7A0A0A0MS04 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC14.19□□□□□ -0.14
TRBV6-7A0A0A0MS04 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC14.19□□□□□ -0.14
TRBV6-7A0A0A0MS04 AL121956.5-201ENST00000625261 221 ntBASIC14.19□□□□□ -0.14
TRBV6-7A0A0A0MS04 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRBV6-7A0A0A0MS04 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRBV6-7A0A0A0MS04 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRBV6-7A0A0A0MS04 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRBV6-7A0A0A0MS04 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC14.19□□□□□ -0.14
TRBV6-7A0A0A0MS04 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC14.19□□□□□ -0.14
TRBV6-7A0A0A0MS04 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRBV6-7A0A0A0MS04 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC14.19□□□□□ -0.14
TRBV6-7A0A0A0MS04 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRBV6-7A0A0A0MS04 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
TRBV6-7A0A0A0MS04 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRBV6-7A0A0A0MS04 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRBV6-7A0A0A0MS04 HLA-A-202ENST00000376806 1854 ntBASIC14.18□□□□□ -0.14
TRBV6-7A0A0A0MS04 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC14.18□□□□□ -0.14
TRBV6-7A0A0A0MS04 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRBV6-7A0A0A0MS04 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRBV6-7A0A0A0MS04 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC14.18□□□□□ -0.14
TRBV6-7A0A0A0MS04 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRBV6-7A0A0A0MS04 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
TRBV6-7A0A0A0MS04 MBP-202ENST00000355994 2772 ntTSL 5 BASIC14.18□□□□□ -0.14
TRBV6-7A0A0A0MS04 PMPCAP1-201ENST00000508114 1576 ntBASIC14.18□□□□□ -0.14
TRBV6-7A0A0A0MS04 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TRBV6-7A0A0A0MS04 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRBV6-7A0A0A0MS04 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRBV6-7A0A0A0MS04 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC14.18□□□□□ -0.14
TRBV6-7A0A0A0MS04 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRBV6-7A0A0A0MS04 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC14.18□□□□□ -0.14
TRBV6-7A0A0A0MS04 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
TRBV6-7A0A0A0MS04 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
TRBV6-7A0A0A0MS04 INTS4P1-201ENST00000438455 1935 ntBASIC14.18□□□□□ -0.14
TRBV6-7A0A0A0MS04 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRBV6-7A0A0A0MS04 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC14.18□□□□□ -0.14
TRBV6-7A0A0A0MS04 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRBV6-7A0A0A0MS04 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
TRBV6-7A0A0A0MS04 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TRBV6-7A0A0A0MS04 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRBV6-7A0A0A0MS04 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC14.18□□□□□ -0.14
TRBV6-7A0A0A0MS04 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC14.18□□□□□ -0.14
TRBV6-7A0A0A0MS04 ACTG1P4-201ENST00000425123 1122 ntBASIC14.18□□□□□ -0.14
TRBV6-7A0A0A0MS04 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC14.18□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms