Protein–RNA interactions for Protein: Q9NYA1

SPHK1, Sphingosine kinase 1, humanhuman

Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1Q9NYA1 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SPHK1Q9NYA1 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC16.29■□□□□ 0.2
SPHK1Q9NYA1 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SPHK1Q9NYA1 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC16.29■□□□□ 0.2
SPHK1Q9NYA1 KRT18P13-201ENST00000400056 1290 ntBASIC16.29■□□□□ 0.2
SPHK1Q9NYA1 MCCD1P2-201ENST00000423228 335 ntBASIC16.29■□□□□ 0.2
SPHK1Q9NYA1 AC074386.1-202ENST00000463561 864 ntBASIC16.29■□□□□ 0.2
SPHK1Q9NYA1 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC16.29■□□□□ 0.2
SPHK1Q9NYA1 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC16.29■□□□□ 0.2
SPHK1Q9NYA1 RPL28-209ENST00000560055 670 ntTSL 3 BASIC16.29■□□□□ 0.2
SPHK1Q9NYA1 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC16.29■□□□□ 0.2
SPHK1Q9NYA1 MPDU1-223ENST00000582151 728 ntBASIC16.29■□□□□ 0.2
SPHK1Q9NYA1 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SPHK1Q9NYA1 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC16.29■□□□□ 0.2
SPHK1Q9NYA1 AC010327.4-202ENST00000591484 748 ntBASIC16.29■□□□□ 0.2
SPHK1Q9NYA1 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SPHK1Q9NYA1 MED16-214ENST00000617672 554 ntTSL 5 BASIC16.29■□□□□ 0.2
SPHK1Q9NYA1 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SPHK1Q9NYA1 AC092919.2-201ENST00000623631 1645 ntBASIC16.29■□□□□ 0.2
SPHK1Q9NYA1 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC16.29■□□□□ 0.2
SPHK1Q9NYA1 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SPHK1Q9NYA1 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SPHK1Q9NYA1 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SPHK1Q9NYA1 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC16.29■□□□□ 0.2
SPHK1Q9NYA1 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SPHK1Q9NYA1 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SPHK1Q9NYA1 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SPHK1Q9NYA1 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
SPHK1Q9NYA1 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SPHK1Q9NYA1 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SPHK1Q9NYA1 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC16.29■□□□□ 0.2
SPHK1Q9NYA1 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
SPHK1Q9NYA1 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SPHK1Q9NYA1 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SPHK1Q9NYA1 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
SPHK1Q9NYA1 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SPHK1Q9NYA1 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SPHK1Q9NYA1 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SPHK1Q9NYA1 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SPHK1Q9NYA1 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SPHK1Q9NYA1 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
SPHK1Q9NYA1 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SPHK1Q9NYA1 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
SPHK1Q9NYA1 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
SPHK1Q9NYA1 TUBB8P12-201ENST00000308911 1335 ntBASIC16.28■□□□□ 0.2
SPHK1Q9NYA1 TUBB7P-202ENST00000428444 1305 ntBASIC16.28■□□□□ 0.2
SPHK1Q9NYA1 TUBB8P7-204ENST00000567960 1332 ntBASIC16.28■□□□□ 0.2
SPHK1Q9NYA1 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
SPHK1Q9NYA1 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC16.28■□□□□ 0.2
SPHK1Q9NYA1 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SPHK1Q9NYA1 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SPHK1Q9NYA1 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SPHK1Q9NYA1 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SPHK1Q9NYA1 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC16.28■□□□□ 0.2
SPHK1Q9NYA1 FIS1-203ENST00000442303 631 ntTSL 3 BASIC16.28■□□□□ 0.2
SPHK1Q9NYA1 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SPHK1Q9NYA1 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC16.28■□□□□ 0.2
SPHK1Q9NYA1 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC16.28■□□□□ 0.2
SPHK1Q9NYA1 MIR4515-201ENST00000584082 81 ntBASIC16.28■□□□□ 0.2
SPHK1Q9NYA1 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC16.28■□□□□ 0.2
SPHK1Q9NYA1 HOTTIP_1.1-201ENST00000620415 57 ntBASIC16.28■□□□□ 0.2
SPHK1Q9NYA1 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC16.28■□□□□ 0.2
SPHK1Q9NYA1 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
SPHK1Q9NYA1 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC16.28■□□□□ 0.2
SPHK1Q9NYA1 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SPHK1Q9NYA1 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
SPHK1Q9NYA1 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SPHK1Q9NYA1 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SPHK1Q9NYA1 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SPHK1Q9NYA1 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SPHK1Q9NYA1 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SPHK1Q9NYA1 AC005915.1-201ENST00000624912 2018 ntBASIC16.28■□□□□ 0.2
SPHK1Q9NYA1 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SPHK1Q9NYA1 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SPHK1Q9NYA1 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
SPHK1Q9NYA1 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SPHK1Q9NYA1 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SPHK1Q9NYA1 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
SPHK1Q9NYA1 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
SPHK1Q9NYA1 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
SPHK1Q9NYA1 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC16.27■□□□□ 0.2
SPHK1Q9NYA1 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SPHK1Q9NYA1 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SPHK1Q9NYA1 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
SPHK1Q9NYA1 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC16.27■□□□□ 0.2
SPHK1Q9NYA1 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
SPHK1Q9NYA1 RPSAP43-201ENST00000402237 625 ntBASIC16.27■□□□□ 0.2
SPHK1Q9NYA1 HMGA1P7-201ENST00000406908 502 ntBASIC16.27■□□□□ 0.2
SPHK1Q9NYA1 FALEC-201ENST00000416894 566 ntTSL 3 BASIC16.27■□□□□ 0.2
SPHK1Q9NYA1 GPX1P2-201ENST00000429271 606 ntBASIC16.27■□□□□ 0.2
SPHK1Q9NYA1 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
SPHK1Q9NYA1 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC16.27■□□□□ 0.2
SPHK1Q9NYA1 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC16.27■□□□□ 0.2
SPHK1Q9NYA1 AC112482.1-201ENST00000492080 688 ntBASIC16.27■□□□□ 0.2
SPHK1Q9NYA1 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC16.27■□□□□ 0.2
SPHK1Q9NYA1 AC091167.2-201ENST00000579581 588 ntBASIC16.27■□□□□ 0.2
SPHK1Q9NYA1 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC16.27■□□□□ 0.2
SPHK1Q9NYA1 MTDHP5-201ENST00000598980 586 ntBASIC16.27■□□□□ 0.2
SPHK1Q9NYA1 AC012569.1-201ENST00000591191 1524 ntBASIC16.27■□□□□ 0.2
SPHK1Q9NYA1 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC16.27■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 65.2 ms