Protein–RNA interactions for Protein: Q9NQS3

NECTIN3, Nectin-3, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3Q9NQS3 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC16.31■□□□□ 0.2
NECTIN3Q9NQS3 FAM215A-202ENST00000632077 792 ntBASIC16.31■□□□□ 0.2
NECTIN3Q9NQS3 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
NECTIN3Q9NQS3 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NECTIN3Q9NQS3 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NECTIN3Q9NQS3 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NECTIN3Q9NQS3 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
NECTIN3Q9NQS3 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
NECTIN3Q9NQS3 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
NECTIN3Q9NQS3 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
NECTIN3Q9NQS3 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NECTIN3Q9NQS3 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NECTIN3Q9NQS3 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC16.31■□□□□ 0.2
NECTIN3Q9NQS3 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC16.31■□□□□ 0.2
NECTIN3Q9NQS3 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NECTIN3Q9NQS3 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC16.31■□□□□ 0.2
NECTIN3Q9NQS3 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NECTIN3Q9NQS3 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
NECTIN3Q9NQS3 AL135999.2-201ENST00000622438 1686 ntBASIC16.3■□□□□ 0.2
NECTIN3Q9NQS3 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
NECTIN3Q9NQS3 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
NECTIN3Q9NQS3 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC16.3■□□□□ 0.2
NECTIN3Q9NQS3 ABR-203ENST00000536794 2213 ntTSL 2 BASIC16.3■□□□□ 0.2
NECTIN3Q9NQS3 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NECTIN3Q9NQS3 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NECTIN3Q9NQS3 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NECTIN3Q9NQS3 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NECTIN3Q9NQS3 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NECTIN3Q9NQS3 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC16.3■□□□□ 0.2
NECTIN3Q9NQS3 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
NECTIN3Q9NQS3 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NECTIN3Q9NQS3 AC097637.2-201ENST00000624096 1997 ntBASIC16.3■□□□□ 0.2
NECTIN3Q9NQS3 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
NECTIN3Q9NQS3 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NECTIN3Q9NQS3 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NECTIN3Q9NQS3 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC16.3■□□□□ 0.2
NECTIN3Q9NQS3 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NECTIN3Q9NQS3 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC16.3■□□□□ 0.2
NECTIN3Q9NQS3 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC16.3■□□□□ 0.2
NECTIN3Q9NQS3 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
NECTIN3Q9NQS3 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC16.3■□□□□ 0.2
NECTIN3Q9NQS3 MIR7706-201ENST00000613747 67 ntBASIC16.3■□□□□ 0.2
NECTIN3Q9NQS3 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
NECTIN3Q9NQS3 AC107918.4-202ENST00000641623 219 ntBASIC16.3■□□□□ 0.2
NECTIN3Q9NQS3 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
NECTIN3Q9NQS3 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC16.3■□□□□ 0.2
NECTIN3Q9NQS3 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NECTIN3Q9NQS3 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC16.3■□□□□ 0.2
NECTIN3Q9NQS3 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
NECTIN3Q9NQS3 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
NECTIN3Q9NQS3 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC16.3■□□□□ 0.2
NECTIN3Q9NQS3 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
NECTIN3Q9NQS3 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NECTIN3Q9NQS3 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NECTIN3Q9NQS3 FLJ38576-201ENST00000623820 2459 ntBASIC16.29■□□□□ 0.2
NECTIN3Q9NQS3 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
NECTIN3Q9NQS3 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC16.29■□□□□ 0.2
NECTIN3Q9NQS3 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC16.29■□□□□ 0.2
NECTIN3Q9NQS3 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NECTIN3Q9NQS3 GID4-202ENST00000376345 1391 ntTSL 3 BASIC16.29■□□□□ 0.2
NECTIN3Q9NQS3 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
NECTIN3Q9NQS3 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
NECTIN3Q9NQS3 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
NECTIN3Q9NQS3 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC16.29■□□□□ 0.2
NECTIN3Q9NQS3 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NECTIN3Q9NQS3 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NECTIN3Q9NQS3 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC16.29■□□□□ 0.2
NECTIN3Q9NQS3 PENK-208ENST00000523051 772 ntTSL 5 BASIC16.29■□□□□ 0.2
NECTIN3Q9NQS3 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC16.29■□□□□ 0.2
NECTIN3Q9NQS3 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
NECTIN3Q9NQS3 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC16.29■□□□□ 0.2
NECTIN3Q9NQS3 AC012640.2-201ENST00000561606 901 ntBASIC16.29■□□□□ 0.2
NECTIN3Q9NQS3 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC16.29■□□□□ 0.2
NECTIN3Q9NQS3 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC16.29■□□□□ 0.2
NECTIN3Q9NQS3 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
NECTIN3Q9NQS3 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC16.29■□□□□ 0.2
NECTIN3Q9NQS3 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NECTIN3Q9NQS3 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
NECTIN3Q9NQS3 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
NECTIN3Q9NQS3 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC16.29■□□□□ 0.2
NECTIN3Q9NQS3 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
NECTIN3Q9NQS3 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC16.29■□□□□ 0.2
NECTIN3Q9NQS3 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
NECTIN3Q9NQS3 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NECTIN3Q9NQS3 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NECTIN3Q9NQS3 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC16.29■□□□□ 0.2
NECTIN3Q9NQS3 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
NECTIN3Q9NQS3 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NECTIN3Q9NQS3 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC16.29■□□□□ 0.2
NECTIN3Q9NQS3 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NECTIN3Q9NQS3 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
NECTIN3Q9NQS3 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
NECTIN3Q9NQS3 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
NECTIN3Q9NQS3 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NECTIN3Q9NQS3 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
NECTIN3Q9NQS3 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
NECTIN3Q9NQS3 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NECTIN3Q9NQS3 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NECTIN3Q9NQS3 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
NECTIN3Q9NQS3 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms