Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
RTN4Q9NQC3 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
RTN4Q9NQC3 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
RTN4Q9NQC3 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
RTN4Q9NQC3 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RTN4Q9NQC3 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RTN4Q9NQC3 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC20.1■□□□□ 0.81
RTN4Q9NQC3 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
RTN4Q9NQC3 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC20.1■□□□□ 0.81
RTN4Q9NQC3 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC20.1■□□□□ 0.81
RTN4Q9NQC3 MFAP1P1-201ENST00000442257 1255 ntBASIC20.1■□□□□ 0.81
RTN4Q9NQC3 AC116562.2-201ENST00000507042 360 ntBASIC20.1■□□□□ 0.81
RTN4Q9NQC3 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC20.1■□□□□ 0.81
RTN4Q9NQC3 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC20.1■□□□□ 0.81
RTN4Q9NQC3 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC20.1■□□□□ 0.81
RTN4Q9NQC3 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
RTN4Q9NQC3 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RTN4Q9NQC3 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RTN4Q9NQC3 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RTN4Q9NQC3 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
RTN4Q9NQC3 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
RTN4Q9NQC3 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RTN4Q9NQC3 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
RTN4Q9NQC3 WDR92-201ENST00000295121 2626 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RTN4Q9NQC3 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RTN4Q9NQC3 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
RTN4Q9NQC3 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RTN4Q9NQC3 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RTN4Q9NQC3 UROS-202ENST00000368778 1556 ntTSL 2 BASIC20.09■□□□□ 0.81
RTN4Q9NQC3 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
RTN4Q9NQC3 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC20.09■□□□□ 0.81
RTN4Q9NQC3 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
RTN4Q9NQC3 AL163051.1-201ENST00000569214 1512 ntBASIC20.09■□□□□ 0.81
RTN4Q9NQC3 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
RTN4Q9NQC3 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RTN4Q9NQC3 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC20.09■□□□□ 0.81
RTN4Q9NQC3 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC20.09■□□□□ 0.81
RTN4Q9NQC3 CD177P1-201ENST00000606252 935 ntBASIC20.09■□□□□ 0.81
RTN4Q9NQC3 AL359736.2-201ENST00000621992 437 ntBASIC20.09■□□□□ 0.81
RTN4Q9NQC3 AC087164.2-201ENST00000624514 3130 ntBASIC20.09■□□□□ 0.81
RTN4Q9NQC3 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RTN4Q9NQC3 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
RTN4Q9NQC3 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC20.09■□□□□ 0.81
RTN4Q9NQC3 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RTN4Q9NQC3 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
RTN4Q9NQC3 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RTN4Q9NQC3 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC20.09■□□□□ 0.81
RTN4Q9NQC3 VAX1-201ENST00000277905 4494 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
RTN4Q9NQC3 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC20.09■□□□□ 0.81
RTN4Q9NQC3 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
RTN4Q9NQC3 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC20.09■□□□□ 0.81
RTN4Q9NQC3 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RTN4Q9NQC3 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RTN4Q9NQC3 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC20.08■□□□□ 0.81
RTN4Q9NQC3 AC036111.1-201ENST00000533973 1582 ntBASIC20.08■□□□□ 0.81
RTN4Q9NQC3 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RTN4Q9NQC3 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
RTN4Q9NQC3 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
RTN4Q9NQC3 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC20.08■□□□□ 0.81
RTN4Q9NQC3 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.81
RTN4Q9NQC3 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
RTN4Q9NQC3 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
RTN4Q9NQC3 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC20.08■□□□□ 0.81
RTN4Q9NQC3 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
RTN4Q9NQC3 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC20.08■□□□□ 0.81
RTN4Q9NQC3 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
RTN4Q9NQC3 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RTN4Q9NQC3 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
RTN4Q9NQC3 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
RTN4Q9NQC3 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
RTN4Q9NQC3 HMGB3P14-201ENST00000494195 599 ntBASIC20.08■□□□□ 0.81
RTN4Q9NQC3 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC20.08■□□□□ 0.81
RTN4Q9NQC3 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC20.08■□□□□ 0.81
RTN4Q9NQC3 MIR4674-201ENST00000582457 87 ntBASIC20.08■□□□□ 0.81
RTN4Q9NQC3 DGCR10-201ENST00000609839 495 ntBASIC20.08■□□□□ 0.81
RTN4Q9NQC3 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC20.08■□□□□ 0.81
RTN4Q9NQC3 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
RTN4Q9NQC3 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC20.08■□□□□ 0.8
RTN4Q9NQC3 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
RTN4Q9NQC3 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC20.08■□□□□ 0.8
RTN4Q9NQC3 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
RTN4Q9NQC3 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
RTN4Q9NQC3 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
RTN4Q9NQC3 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
RTN4Q9NQC3 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
RTN4Q9NQC3 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC20.08■□□□□ 0.8
RTN4Q9NQC3 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
RTN4Q9NQC3 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
RTN4Q9NQC3 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
RTN4Q9NQC3 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
RTN4Q9NQC3 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
RTN4Q9NQC3 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RTN4Q9NQC3 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC20.07■□□□□ 0.8
RTN4Q9NQC3 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RTN4Q9NQC3 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC20.07■□□□□ 0.8
RTN4Q9NQC3 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
RTN4Q9NQC3 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RTN4Q9NQC3 IFT22-210ENST00000517481 1657 ntTSL 2 BASIC20.07■□□□□ 0.8
RTN4Q9NQC3 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RTN4Q9NQC3 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC20.07■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 72 ms