Protein–RNA interactions for Protein: Q9NPJ1

MKKS, McKusick-Kaufman/Bardet-Biedl syndromes putative chaperonin, humanhuman

Predicted RBP Predictions only

Length 570 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKKSQ9NPJ1 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
MKKSQ9NPJ1 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
MKKSQ9NPJ1 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC16.03■□□□□ 0.16
MKKSQ9NPJ1 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
MKKSQ9NPJ1 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
MKKSQ9NPJ1 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC16.03■□□□□ 0.16
MKKSQ9NPJ1 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
MKKSQ9NPJ1 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
MKKSQ9NPJ1 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
MKKSQ9NPJ1 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC16.03■□□□□ 0.16
MKKSQ9NPJ1 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
MKKSQ9NPJ1 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
MKKSQ9NPJ1 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC16.03■□□□□ 0.16
MKKSQ9NPJ1 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC16.03■□□□□ 0.16
MKKSQ9NPJ1 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
MKKSQ9NPJ1 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
MKKSQ9NPJ1 MIR1233-2-201ENST00000408138 82 ntBASIC16.03■□□□□ 0.16
MKKSQ9NPJ1 MIR1233-1-201ENST00000408722 82 ntBASIC16.03■□□□□ 0.16
MKKSQ9NPJ1 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC16.03■□□□□ 0.16
MKKSQ9NPJ1 UPF3AP3-201ENST00000420996 769 ntBASIC16.03■□□□□ 0.16
MKKSQ9NPJ1 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC16.03■□□□□ 0.16
MKKSQ9NPJ1 KRT19P2-202ENST00000557173 1012 ntBASIC16.03■□□□□ 0.16
MKKSQ9NPJ1 PDPK2P-202ENST00000562415 1191 ntBASIC16.03■□□□□ 0.16
MKKSQ9NPJ1 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
MKKSQ9NPJ1 GPALPP1-207ENST00000611650 899 ntBASIC16.03■□□□□ 0.16
MKKSQ9NPJ1 HOTTIP_1.1-201ENST00000620415 57 ntBASIC16.03■□□□□ 0.16
MKKSQ9NPJ1 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
MKKSQ9NPJ1 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
MKKSQ9NPJ1 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC16.03■□□□□ 0.16
MKKSQ9NPJ1 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
MKKSQ9NPJ1 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
MKKSQ9NPJ1 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
MKKSQ9NPJ1 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
MKKSQ9NPJ1 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
MKKSQ9NPJ1 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
MKKSQ9NPJ1 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
MKKSQ9NPJ1 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC16.03■□□□□ 0.16
MKKSQ9NPJ1 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
MKKSQ9NPJ1 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
MKKSQ9NPJ1 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
MKKSQ9NPJ1 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
MKKSQ9NPJ1 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC16.02■□□□□ 0.16
MKKSQ9NPJ1 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
MKKSQ9NPJ1 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
MKKSQ9NPJ1 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
MKKSQ9NPJ1 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
MKKSQ9NPJ1 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC16.02■□□□□ 0.16
MKKSQ9NPJ1 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.16
MKKSQ9NPJ1 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
MKKSQ9NPJ1 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
MKKSQ9NPJ1 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
MKKSQ9NPJ1 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
MKKSQ9NPJ1 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC16.02■□□□□ 0.16
MKKSQ9NPJ1 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
MKKSQ9NPJ1 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
MKKSQ9NPJ1 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
MKKSQ9NPJ1 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
MKKSQ9NPJ1 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC16.02■□□□□ 0.16
MKKSQ9NPJ1 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC16.02■□□□□ 0.16
MKKSQ9NPJ1 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
MKKSQ9NPJ1 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC16.02■□□□□ 0.16
MKKSQ9NPJ1 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC16.02■□□□□ 0.16
MKKSQ9NPJ1 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC16.02■□□□□ 0.16
MKKSQ9NPJ1 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC16.02■□□□□ 0.16
MKKSQ9NPJ1 AL513480.1-201ENST00000451731 511 ntBASIC16.02■□□□□ 0.16
MKKSQ9NPJ1 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC16.02■□□□□ 0.16
MKKSQ9NPJ1 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
MKKSQ9NPJ1 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC16.02■□□□□ 0.16
MKKSQ9NPJ1 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC16.02■□□□□ 0.16
MKKSQ9NPJ1 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
MKKSQ9NPJ1 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
MKKSQ9NPJ1 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC16.02■□□□□ 0.16
MKKSQ9NPJ1 ACTL9-202ENST00000612068 1252 ntBASIC16.02■□□□□ 0.16
MKKSQ9NPJ1 AC006538.3-201ENST00000612495 578 ntBASIC16.02■□□□□ 0.16
MKKSQ9NPJ1 AL513190.1-201ENST00000621254 727 ntBASIC16.02■□□□□ 0.16
MKKSQ9NPJ1 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
MKKSQ9NPJ1 AC092865.6-201ENST00000642101 219 ntBASIC16.02■□□□□ 0.16
MKKSQ9NPJ1 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC16.02■□□□□ 0.16
MKKSQ9NPJ1 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
MKKSQ9NPJ1 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
MKKSQ9NPJ1 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC16.02■□□□□ 0.15
MKKSQ9NPJ1 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
MKKSQ9NPJ1 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
MKKSQ9NPJ1 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
MKKSQ9NPJ1 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC16.02■□□□□ 0.15
MKKSQ9NPJ1 CYP51A1P2-201ENST00000419457 1499 ntBASIC16.02■□□□□ 0.15
MKKSQ9NPJ1 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC16.02■□□□□ 0.15
MKKSQ9NPJ1 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC16.02■□□□□ 0.15
MKKSQ9NPJ1 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
MKKSQ9NPJ1 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
MKKSQ9NPJ1 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC16.02■□□□□ 0.15
MKKSQ9NPJ1 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC16.02■□□□□ 0.15
MKKSQ9NPJ1 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
MKKSQ9NPJ1 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.15
MKKSQ9NPJ1 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC16.02■□□□□ 0.15
MKKSQ9NPJ1 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC16.01■□□□□ 0.15
MKKSQ9NPJ1 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC16.01■□□□□ 0.15
MKKSQ9NPJ1 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
MKKSQ9NPJ1 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC16.01■□□□□ 0.15
MKKSQ9NPJ1 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms