Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
CHD8Q9HCK8 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CHD8Q9HCK8 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC15.49■□□□□ 0.07
CHD8Q9HCK8 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
CHD8Q9HCK8 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
CHD8Q9HCK8 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CHD8Q9HCK8 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
CHD8Q9HCK8 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
CHD8Q9HCK8 HNRNPA1P32-201ENST00000396326 963 ntBASIC15.49■□□□□ 0.07
CHD8Q9HCK8 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CHD8Q9HCK8 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC15.49■□□□□ 0.07
CHD8Q9HCK8 PTGES2-AS1-201ENST00000443493 2100 ntBASIC15.49■□□□□ 0.07
CHD8Q9HCK8 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC15.49■□□□□ 0.07
CHD8Q9HCK8 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC15.49■□□□□ 0.07
CHD8Q9HCK8 AC061992.1-201ENST00000592569 777 ntTSL 3 BASIC15.49■□□□□ 0.07
CHD8Q9HCK8 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC15.49■□□□□ 0.07
CHD8Q9HCK8 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC15.49■□□□□ 0.07
CHD8Q9HCK8 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC15.49■□□□□ 0.07
CHD8Q9HCK8 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC15.49■□□□□ 0.07
CHD8Q9HCK8 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CHD8Q9HCK8 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
CHD8Q9HCK8 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
CHD8Q9HCK8 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CHD8Q9HCK8 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
CHD8Q9HCK8 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC15.49■□□□□ 0.07
CHD8Q9HCK8 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CHD8Q9HCK8 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CHD8Q9HCK8 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
CHD8Q9HCK8 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC15.49■□□□□ 0.07
CHD8Q9HCK8 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC15.49■□□□□ 0.07
CHD8Q9HCK8 ARMC12-203ENST00000373869 1111 ntTSL 2 BASIC15.49■□□□□ 0.07
CHD8Q9HCK8 TPO-206ENST00000382269 1155 ntTSL 5 BASIC15.49■□□□□ 0.07
CHD8Q9HCK8 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
CHD8Q9HCK8 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC15.49■□□□□ 0.07
CHD8Q9HCK8 AL136361.1-201ENST00000435429 506 ntTSL 3 BASIC15.49■□□□□ 0.07
CHD8Q9HCK8 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC15.49■□□□□ 0.07
CHD8Q9HCK8 RN7SL720P-201ENST00000488178 304 ntBASIC15.49■□□□□ 0.07
CHD8Q9HCK8 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CHD8Q9HCK8 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CHD8Q9HCK8 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CHD8Q9HCK8 AMT-232ENST00000636199 1546 ntTSL 5 BASIC15.49■□□□□ 0.07
CHD8Q9HCK8 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
CHD8Q9HCK8 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CHD8Q9HCK8 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CHD8Q9HCK8 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CHD8Q9HCK8 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
CHD8Q9HCK8 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CHD8Q9HCK8 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC15.48■□□□□ 0.07
CHD8Q9HCK8 SPDYE4-201ENST00000328794 923 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CHD8Q9HCK8 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CHD8Q9HCK8 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC15.48■□□□□ 0.07
CHD8Q9HCK8 Z93015.1-201ENST00000451718 390 ntBASIC15.48■□□□□ 0.07
CHD8Q9HCK8 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CHD8Q9HCK8 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC15.48■□□□□ 0.07
CHD8Q9HCK8 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CHD8Q9HCK8 LINC00116-203ENST00000611969 441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
CHD8Q9HCK8 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CHD8Q9HCK8 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC15.48■□□□□ 0.07
CHD8Q9HCK8 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC15.48■□□□□ 0.07
CHD8Q9HCK8 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
CHD8Q9HCK8 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CHD8Q9HCK8 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CHD8Q9HCK8 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC15.48■□□□□ 0.07
CHD8Q9HCK8 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CHD8Q9HCK8 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CHD8Q9HCK8 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CHD8Q9HCK8 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CHD8Q9HCK8 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
CHD8Q9HCK8 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
CHD8Q9HCK8 RPL37A-203ENST00000427280 698 ntTSL 5 BASIC15.48■□□□□ 0.07
CHD8Q9HCK8 RPL37A-206ENST00000456586 401 ntTSL 5 BASIC15.48■□□□□ 0.07
CHD8Q9HCK8 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC15.48■□□□□ 0.07
CHD8Q9HCK8 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC15.48■□□□□ 0.07
CHD8Q9HCK8 INO80C-210ENST00000590757 595 ntTSL 2 BASIC15.48■□□□□ 0.07
CHD8Q9HCK8 RPL37A-211ENST00000598925 775 ntTSL 5 BASIC15.48■□□□□ 0.07
CHD8Q9HCK8 AC005695.3-201ENST00000614522 232 ntBASIC15.48■□□□□ 0.07
CHD8Q9HCK8 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
CHD8Q9HCK8 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CHD8Q9HCK8 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
CHD8Q9HCK8 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC15.48■□□□□ 0.07
CHD8Q9HCK8 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CHD8Q9HCK8 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CHD8Q9HCK8 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
CHD8Q9HCK8 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CHD8Q9HCK8 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC15.48■□□□□ 0.07
CHD8Q9HCK8 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC15.48■□□□□ 0.07
CHD8Q9HCK8 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
CHD8Q9HCK8 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CHD8Q9HCK8 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC15.47■□□□□ 0.07
CHD8Q9HCK8 AP000997.3-201ENST00000623333 2250 ntBASIC15.47■□□□□ 0.07
CHD8Q9HCK8 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CHD8Q9HCK8 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CHD8Q9HCK8 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CHD8Q9HCK8 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC15.47■□□□□ 0.07
CHD8Q9HCK8 AL137856.1-201ENST00000429398 773 ntTSL 3 BASIC15.47■□□□□ 0.07
CHD8Q9HCK8 AC073094.1-201ENST00000453798 433 ntTSL 2 BASIC15.47■□□□□ 0.07
CHD8Q9HCK8 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC15.47■□□□□ 0.07
CHD8Q9HCK8 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC15.47■□□□□ 0.07
CHD8Q9HCK8 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC15.47■□□□□ 0.07
CHD8Q9HCK8 AL136301.1-201ENST00000615830 422 ntBASIC15.47■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms