Protein–RNA interactions for Protein: Q9H422

HIPK3, Homeodomain-interacting protein kinase 3, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3Q9H422 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
HIPK3Q9H422 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
HIPK3Q9H422 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC18.39■□□□□ 0.54
HIPK3Q9H422 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC18.39■□□□□ 0.53
HIPK3Q9H422 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC18.39■□□□□ 0.53
HIPK3Q9H422 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC18.39■□□□□ 0.53
HIPK3Q9H422 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
HIPK3Q9H422 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC18.39■□□□□ 0.53
HIPK3Q9H422 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC18.39■□□□□ 0.53
HIPK3Q9H422 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC18.39■□□□□ 0.53
HIPK3Q9H422 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC18.39■□□□□ 0.53
HIPK3Q9H422 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HIPK3Q9H422 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
HIPK3Q9H422 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
HIPK3Q9H422 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HIPK3Q9H422 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
HIPK3Q9H422 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC18.39■□□□□ 0.53
HIPK3Q9H422 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC18.39■□□□□ 0.53
HIPK3Q9H422 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC18.39■□□□□ 0.53
HIPK3Q9H422 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC18.39■□□□□ 0.53
HIPK3Q9H422 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
HIPK3Q9H422 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC18.39■□□□□ 0.53
HIPK3Q9H422 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
HIPK3Q9H422 GPER1-207ENST00000619052 571 ntTSL 2 BASIC18.39■□□□□ 0.53
HIPK3Q9H422 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC18.39■□□□□ 0.53
HIPK3Q9H422 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HIPK3Q9H422 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HIPK3Q9H422 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
HIPK3Q9H422 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
HIPK3Q9H422 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC18.39■□□□□ 0.53
HIPK3Q9H422 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC18.39■□□□□ 0.53
HIPK3Q9H422 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC18.39■□□□□ 0.53
HIPK3Q9H422 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HIPK3Q9H422 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
HIPK3Q9H422 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
HIPK3Q9H422 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC18.38■□□□□ 0.53
HIPK3Q9H422 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
HIPK3Q9H422 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
HIPK3Q9H422 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
HIPK3Q9H422 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HIPK3Q9H422 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
HIPK3Q9H422 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
HIPK3Q9H422 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
HIPK3Q9H422 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
HIPK3Q9H422 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC18.38■□□□□ 0.53
HIPK3Q9H422 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
HIPK3Q9H422 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HIPK3Q9H422 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
HIPK3Q9H422 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HIPK3Q9H422 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
HIPK3Q9H422 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC18.38■□□□□ 0.53
HIPK3Q9H422 ARSEP1-201ENST00000420443 635 ntBASIC18.38■□□□□ 0.53
HIPK3Q9H422 CDK2AP2P3-201ENST00000422476 372 ntBASIC18.38■□□□□ 0.53
HIPK3Q9H422 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC18.38■□□□□ 0.53
HIPK3Q9H422 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC18.38■□□□□ 0.53
HIPK3Q9H422 MPDU1-223ENST00000582151 728 ntBASIC18.38■□□□□ 0.53
HIPK3Q9H422 AC021097.1-201ENST00000607902 574 ntBASIC18.38■□□□□ 0.53
HIPK3Q9H422 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HIPK3Q9H422 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
HIPK3Q9H422 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
HIPK3Q9H422 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HIPK3Q9H422 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
HIPK3Q9H422 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HIPK3Q9H422 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC18.38■□□□□ 0.53
HIPK3Q9H422 PCDHB18P-201ENST00000524813 2368 ntBASIC18.38■□□□□ 0.53
HIPK3Q9H422 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
HIPK3Q9H422 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC18.37■□□□□ 0.53
HIPK3Q9H422 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HIPK3Q9H422 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HIPK3Q9H422 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
HIPK3Q9H422 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HIPK3Q9H422 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC18.37■□□□□ 0.53
HIPK3Q9H422 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HIPK3Q9H422 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC18.37■□□□□ 0.53
HIPK3Q9H422 PP14571-201ENST00000404327 934 ntTSL 2 BASIC18.37■□□□□ 0.53
HIPK3Q9H422 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC18.37■□□□□ 0.53
HIPK3Q9H422 PTPA-220ENST00000436883 532 ntTSL 4 BASIC18.37■□□□□ 0.53
HIPK3Q9H422 STOM-203ENST00000538954 1257 ntTSL 5 BASIC18.37■□□□□ 0.53
HIPK3Q9H422 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
HIPK3Q9H422 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC18.37■□□□□ 0.53
HIPK3Q9H422 AC073389.1-201ENST00000595595 795 ntBASIC18.37■□□□□ 0.53
HIPK3Q9H422 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC18.37■□□□□ 0.53
HIPK3Q9H422 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC18.37■□□□□ 0.53
HIPK3Q9H422 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC18.37■□□□□ 0.53
HIPK3Q9H422 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HIPK3Q9H422 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HIPK3Q9H422 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC18.37■□□□□ 0.53
HIPK3Q9H422 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HIPK3Q9H422 EGFEM1P-202ENST00000431685 1563 ntBASIC18.37■□□□□ 0.53
HIPK3Q9H422 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
HIPK3Q9H422 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
HIPK3Q9H422 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC18.37■□□□□ 0.53
HIPK3Q9H422 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC18.37■□□□□ 0.53
HIPK3Q9H422 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HIPK3Q9H422 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
HIPK3Q9H422 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
HIPK3Q9H422 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
HIPK3Q9H422 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HIPK3Q9H422 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HIPK3Q9H422 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms