Protein–RNA interactions for Protein: Q9H2C1

LHX5, LIM/homeobox protein Lhx5, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX5Q9H2C1 PMS2P7-201ENST00000506558 1336 ntBASIC17.84■□□□□ 0.45
LHX5Q9H2C1 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
LHX5Q9H2C1 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC17.84■□□□□ 0.45
LHX5Q9H2C1 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LHX5Q9H2C1 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC17.84■□□□□ 0.45
LHX5Q9H2C1 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC17.84■□□□□ 0.45
LHX5Q9H2C1 VN2R19P-201ENST00000442399 1052 ntBASIC17.84■□□□□ 0.45
LHX5Q9H2C1 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC17.84■□□□□ 0.45
LHX5Q9H2C1 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC17.84■□□□□ 0.45
LHX5Q9H2C1 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC17.84■□□□□ 0.45
LHX5Q9H2C1 AC145285.3-201ENST00000564603 959 ntBASIC17.84■□□□□ 0.45
LHX5Q9H2C1 CYB561-216ENST00000582297 897 ntTSL 3 BASIC17.84■□□□□ 0.45
LHX5Q9H2C1 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC17.84■□□□□ 0.45
LHX5Q9H2C1 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC17.84■□□□□ 0.45
LHX5Q9H2C1 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC17.84■□□□□ 0.45
LHX5Q9H2C1 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LHX5Q9H2C1 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LHX5Q9H2C1 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
LHX5Q9H2C1 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
LHX5Q9H2C1 SNX33P1-201ENST00000592116 1762 ntBASIC17.84■□□□□ 0.45
LHX5Q9H2C1 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
LHX5Q9H2C1 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC17.83■□□□□ 0.45
LHX5Q9H2C1 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
LHX5Q9H2C1 AC104109.2-201ENST00000602919 1418 ntBASIC17.83■□□□□ 0.45
LHX5Q9H2C1 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
LHX5Q9H2C1 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
LHX5Q9H2C1 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC17.83■□□□□ 0.45
LHX5Q9H2C1 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
LHX5Q9H2C1 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
LHX5Q9H2C1 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
LHX5Q9H2C1 HCG4-201ENST00000418983 998 ntBASIC17.83■□□□□ 0.44
LHX5Q9H2C1 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
LHX5Q9H2C1 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC17.83■□□□□ 0.44
LHX5Q9H2C1 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
LHX5Q9H2C1 Z83851.2-201ENST00000609564 659 ntBASIC17.83■□□□□ 0.44
LHX5Q9H2C1 ACTL9-202ENST00000612068 1252 ntBASIC17.83■□□□□ 0.44
LHX5Q9H2C1 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
LHX5Q9H2C1 HLA-A-202ENST00000376806 1854 ntBASIC17.83■□□□□ 0.44
LHX5Q9H2C1 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
LHX5Q9H2C1 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
LHX5Q9H2C1 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
LHX5Q9H2C1 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
LHX5Q9H2C1 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC17.83■□□□□ 0.44
LHX5Q9H2C1 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
LHX5Q9H2C1 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
LHX5Q9H2C1 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
LHX5Q9H2C1 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC17.83■□□□□ 0.44
LHX5Q9H2C1 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
LHX5Q9H2C1 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
LHX5Q9H2C1 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
LHX5Q9H2C1 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
LHX5Q9H2C1 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
LHX5Q9H2C1 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC17.82■□□□□ 0.44
LHX5Q9H2C1 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
LHX5Q9H2C1 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
LHX5Q9H2C1 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC17.82■□□□□ 0.44
LHX5Q9H2C1 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC17.82■□□□□ 0.44
LHX5Q9H2C1 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
LHX5Q9H2C1 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
LHX5Q9H2C1 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LHX5Q9H2C1 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
LHX5Q9H2C1 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
LHX5Q9H2C1 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LHX5Q9H2C1 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
LHX5Q9H2C1 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
LHX5Q9H2C1 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC17.82■□□□□ 0.44
LHX5Q9H2C1 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
LHX5Q9H2C1 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC17.82■□□□□ 0.44
LHX5Q9H2C1 AC092865.5-201ENST00000545435 363 ntBASIC17.82■□□□□ 0.44
LHX5Q9H2C1 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LHX5Q9H2C1 MIR4751-201ENST00000578027 74 ntBASIC17.82■□□□□ 0.44
LHX5Q9H2C1 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
LHX5Q9H2C1 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC17.82■□□□□ 0.44
LHX5Q9H2C1 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC17.82■□□□□ 0.44
LHX5Q9H2C1 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
LHX5Q9H2C1 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.82■□□□□ 0.44
LHX5Q9H2C1 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LHX5Q9H2C1 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LHX5Q9H2C1 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LHX5Q9H2C1 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC17.82■□□□□ 0.44
LHX5Q9H2C1 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
LHX5Q9H2C1 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
LHX5Q9H2C1 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LHX5Q9H2C1 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC17.81■□□□□ 0.44
LHX5Q9H2C1 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LHX5Q9H2C1 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC17.81■□□□□ 0.44
LHX5Q9H2C1 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
LHX5Q9H2C1 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LHX5Q9H2C1 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
LHX5Q9H2C1 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
LHX5Q9H2C1 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LHX5Q9H2C1 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
LHX5Q9H2C1 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
LHX5Q9H2C1 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
LHX5Q9H2C1 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
LHX5Q9H2C1 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC17.81■□□□□ 0.44
LHX5Q9H2C1 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
LHX5Q9H2C1 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LHX5Q9H2C1 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LHX5Q9H2C1 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms