Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 TRAV29DV5-201ENST00000390458 469 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
KRTAP3-3Q9BYR6 AL137058.2-203ENST00000398039 825 ntTSL 3 BASIC10.7□□□□□ -0.7
KRTAP3-3Q9BYR6 NPIPB2-202ENST00000399147 1194 ntAPPRIS P5 TSL 5 BASIC10.7□□□□□ -0.7
KRTAP3-3Q9BYR6 AL136116.3-201ENST00000402907 1138 ntBASIC10.7□□□□□ -0.7
KRTAP3-3Q9BYR6 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
KRTAP3-3Q9BYR6 LINC01824-201ENST00000436082 528 ntTSL 4 BASIC10.7□□□□□ -0.7
KRTAP3-3Q9BYR6 GTF3AP5-201ENST00000442645 697 ntBASIC10.7□□□□□ -0.7
KRTAP3-3Q9BYR6 KRT18P66-201ENST00000452970 1269 ntBASIC10.7□□□□□ -0.7
KRTAP3-3Q9BYR6 SRP72-202ENST00000504757 745 ntTSL 2 BASIC10.7□□□□□ -0.7
KRTAP3-3Q9BYR6 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC10.7□□□□□ -0.7
KRTAP3-3Q9BYR6 RNU6-759P-201ENST00000516740 103 ntBASIC10.7□□□□□ -0.7
KRTAP3-3Q9BYR6 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC10.7□□□□□ -0.7
KRTAP3-3Q9BYR6 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC10.7□□□□□ -0.7
KRTAP3-3Q9BYR6 AC025857.1-201ENST00000525252 377 ntBASIC10.7□□□□□ -0.7
KRTAP3-3Q9BYR6 AP000873.5-201ENST00000533906 236 ntBASIC10.7□□□□□ -0.7
KRTAP3-3Q9BYR6 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC10.7□□□□□ -0.7
KRTAP3-3Q9BYR6 ELK3-206ENST00000552142 1242 ntTSL 5 BASIC10.7□□□□□ -0.7
KRTAP3-3Q9BYR6 MORF4L1-208ENST00000558746 874 ntTSL 3 BASIC10.7□□□□□ -0.7
KRTAP3-3Q9BYR6 AC103724.3-201ENST00000564481 992 ntBASIC10.7□□□□□ -0.7
KRTAP3-3Q9BYR6 SPINT1-AS1-204ENST00000568419 629 ntTSL 3 BASIC10.7□□□□□ -0.7
KRTAP3-3Q9BYR6 AC005921.2-201ENST00000574246 670 ntTSL 5 BASIC10.7□□□□□ -0.7
KRTAP3-3Q9BYR6 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC10.7□□□□□ -0.7
KRTAP3-3Q9BYR6 AC010359.1-201ENST00000602982 507 ntBASIC10.7□□□□□ -0.7
KRTAP3-3Q9BYR6 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC10.7□□□□□ -0.7
KRTAP3-3Q9BYR6 AC122133.1-201ENST00000613964 233 ntBASIC10.7□□□□□ -0.7
KRTAP3-3Q9BYR6 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC10.7□□□□□ -0.7
KRTAP3-3Q9BYR6 AC009086.3-201ENST00000623486 1008 ntBASIC10.7□□□□□ -0.7
KRTAP3-3Q9BYR6 AC073263.3-201ENST00000624449 858 ntBASIC10.7□□□□□ -0.7
KRTAP3-3Q9BYR6 LINC01778-208ENST00000635288 1095 ntTSL 5 BASIC10.7□□□□□ -0.7
KRTAP3-3Q9BYR6 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
KRTAP3-3Q9BYR6 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
KRTAP3-3Q9BYR6 TP53-208ENST00000504290 2331 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
KRTAP3-3Q9BYR6 TP53-220ENST00000610623 2331 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
KRTAP3-3Q9BYR6 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC10.7□□□□□ -0.7
KRTAP3-3Q9BYR6 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
KRTAP3-3Q9BYR6 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC10.7□□□□□ -0.7
KRTAP3-3Q9BYR6 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
KRTAP3-3Q9BYR6 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
KRTAP3-3Q9BYR6 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
KRTAP3-3Q9BYR6 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
KRTAP3-3Q9BYR6 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
KRTAP3-3Q9BYR6 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC10.7□□□□□ -0.7
KRTAP3-3Q9BYR6 AC112200.2-201ENST00000624673 1739 ntBASIC10.7□□□□□ -0.7
KRTAP3-3Q9BYR6 LINC00943-204ENST00000537374 1688 ntTSL 5 BASIC10.69□□□□□ -0.7
KRTAP3-3Q9BYR6 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
KRTAP3-3Q9BYR6 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
KRTAP3-3Q9BYR6 MED17-221ENST00000639724 2317 ntTSL 5 BASIC10.69□□□□□ -0.7
KRTAP3-3Q9BYR6 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
KRTAP3-3Q9BYR6 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC10.69□□□□□ -0.7
KRTAP3-3Q9BYR6 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
KRTAP3-3Q9BYR6 LINC02533-201ENST00000563079 2272 ntTSL 4 BASIC10.69□□□□□ -0.7
KRTAP3-3Q9BYR6 EHHADH-AS1-201ENST00000417720 1416 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
KRTAP3-3Q9BYR6 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
KRTAP3-3Q9BYR6 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
KRTAP3-3Q9BYR6 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
KRTAP3-3Q9BYR6 GOLGA2P6-201ENST00000340929 2049 ntBASIC10.69□□□□□ -0.7
KRTAP3-3Q9BYR6 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
KRTAP3-3Q9BYR6 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC10.69□□□□□ -0.7
KRTAP3-3Q9BYR6 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC10.69□□□□□ -0.7
KRTAP3-3Q9BYR6 AC005703.6-201ENST00000623265 1329 ntBASIC10.69□□□□□ -0.7
KRTAP3-3Q9BYR6 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
KRTAP3-3Q9BYR6 OR9G1-201ENST00000312153 918 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
KRTAP3-3Q9BYR6 KRTAP19-4-201ENST00000334058 310 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
KRTAP3-3Q9BYR6 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
KRTAP3-3Q9BYR6 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
KRTAP3-3Q9BYR6 RPL35P2-201ENST00000402419 363 ntBASIC10.69□□□□□ -0.7
KRTAP3-3Q9BYR6 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
KRTAP3-3Q9BYR6 LINC02257-201ENST00000412445 605 ntTSL 2 BASIC10.69□□□□□ -0.7
KRTAP3-3Q9BYR6 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC10.69□□□□□ -0.7
KRTAP3-3Q9BYR6 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC10.69□□□□□ -0.7
KRTAP3-3Q9BYR6 AC011233.1-201ENST00000422812 283 ntBASIC10.69□□□□□ -0.7
KRTAP3-3Q9BYR6 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC10.69□□□□□ -0.7
KRTAP3-3Q9BYR6 NAP1L4P2-201ENST00000425958 899 ntBASIC10.69□□□□□ -0.7
KRTAP3-3Q9BYR6 AC244033.1-201ENST00000426826 870 ntBASIC10.69□□□□□ -0.7
KRTAP3-3Q9BYR6 MTCO1P57-201ENST00000432182 261 ntBASIC10.69□□□□□ -0.7
KRTAP3-3Q9BYR6 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC10.69□□□□□ -0.7
KRTAP3-3Q9BYR6 APCDD1L-AS1-205ENST00000439558 648 ntTSL 5 BASIC10.69□□□□□ -0.7
KRTAP3-3Q9BYR6 AC073052.1-201ENST00000440417 714 ntBASIC10.69□□□□□ -0.7
KRTAP3-3Q9BYR6 HNRNPA1P57-202ENST00000452488 958 ntBASIC10.69□□□□□ -0.7
KRTAP3-3Q9BYR6 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC10.69□□□□□ -0.7
KRTAP3-3Q9BYR6 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC10.69□□□□□ -0.7
KRTAP3-3Q9BYR6 CLTA-206ENST00000466396 695 ntTSL 2 BASIC10.69□□□□□ -0.7
KRTAP3-3Q9BYR6 AC004924.1-201ENST00000480160 781 ntBASIC10.69□□□□□ -0.7
KRTAP3-3Q9BYR6 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC10.69□□□□□ -0.7
KRTAP3-3Q9BYR6 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
KRTAP3-3Q9BYR6 AC079140.3-201ENST00000511111 550 ntBASIC10.69□□□□□ -0.7
KRTAP3-3Q9BYR6 AC010343.3-201ENST00000512323 446 ntTSL 3 BASIC10.69□□□□□ -0.7
KRTAP3-3Q9BYR6 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC10.69□□□□□ -0.7
KRTAP3-3Q9BYR6 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC10.69□□□□□ -0.7
KRTAP3-3Q9BYR6 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC10.69□□□□□ -0.7
KRTAP3-3Q9BYR6 FAM8A2P-201ENST00000528813 1142 ntBASIC10.69□□□□□ -0.7
KRTAP3-3Q9BYR6 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC10.69□□□□□ -0.7
KRTAP3-3Q9BYR6 AC011092.1-201ENST00000533128 1047 ntBASIC10.69□□□□□ -0.7
KRTAP3-3Q9BYR6 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC10.69□□□□□ -0.7
KRTAP3-3Q9BYR6 CLTA-210ENST00000540080 989 ntTSL 2 BASIC10.69□□□□□ -0.7
KRTAP3-3Q9BYR6 CLEC4C-204ENST00000540085 860 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
KRTAP3-3Q9BYR6 RNASE11-206ENST00000553849 1101 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
KRTAP3-3Q9BYR6 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
KRTAP3-3Q9BYR6 ZNF519P2-201ENST00000557032 169 ntBASIC10.69□□□□□ -0.7
KRTAP3-3Q9BYR6 AC026770.1-201ENST00000558994 581 ntTSL 4 BASIC10.69□□□□□ -0.7
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms